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胎儿骨骼系统畸形的产前三联体全外显子组测序。

Prenatal trio-based whole exome sequencing in fetuses with abnormalities of the skeletal system.

机构信息

Prenatal Diagnosis Center, Hangzhou Maternity and Child Care Hospital, 369 Kunpeng Road, Shangcheng District, Hangzhou, 310008, Zhejiang, China.

Department of Cell Biology and Medical Genetics, School of Medicine, Zhejiang University, Hangzhou, Zhejiang, China.

出版信息

Mol Genet Genomics. 2022 Jul;297(4):1017-1026. doi: 10.1007/s00438-022-01899-x. Epub 2022 May 18.

DOI:10.1007/s00438-022-01899-x
PMID:35583673
Abstract

Whole exome sequencing (WES) could yield diagnostic significance in the prenatal diagnosis of skeletal abnormalities. But the phenotypes of fetuses with skeletal abnormalities are heterogenous, and the clinical information we could obtain from an ongoing pregnancy is limited, making the prenatal diagnosis complicated. Therefore, the following interpretation and genetic counseling remain a challenge for clinicians. The aim of this study is to present and investigate the utility of trio-based WES in five fetuses with skeletal anomalies. Five trios with fetal ultrasonic skeletal anomalies were recruited in our study. Fetal specimens and parental peripheral blood were subjected to WES. The fetal skeletal abnormalities were presented through ultrasound scanning images. Fetal WES results showed variants in the PPIB, CHST3, COL1A1, and FGFR3 genes in the five trios. Inherited variants were found in two of the trios, while de novo variants were observed in three of them. Two novel compound heterozygous variants (c.437C > A and c.1044C > G) in CHST3 were identified. We presented five trios with fetal skeletal anomalies, found two novel variants and broadened the spectrum of variants associated with skeletal abnormalities, which would help the establishment of genotype-phenotype relationship in the prenatal setting. Trio-based WES could assist the prenatal diagnosis and genetic counseling of fetuses with skeletal abnormalities.

摘要

全外显子测序(WES)可在骨骼异常的产前诊断中提供有诊断意义的结果。但骨骼异常胎儿的表型具有异质性,且我们从正在进行的妊娠中获得的临床信息有限,使得产前诊断变得复杂。因此,以下解释和遗传咨询对临床医生来说仍然是一个挑战。本研究旨在介绍和研究基于三亲的 WES 在五例骨骼异常胎儿中的应用。我们的研究纳入了五例存在胎儿超声骨骼异常的三亲家庭。对胎儿标本和父母外周血进行 WES。通过超声扫描图像呈现胎儿骨骼异常。胎儿 WES 结果显示在五个三亲家庭中,PPIB、CHST3、COL1A1 和 FGFR3 基因存在变异。在两个三亲家庭中发现了遗传变异,而在三个三亲家庭中观察到了新生变异。在 CHST3 中发现了两个新的复合杂合变异(c.437C > A 和 c.1044C > G)。我们呈现了五例存在胎儿骨骼异常的三亲家庭,发现了两个新的变异,并扩大了与骨骼异常相关的变异谱,这有助于在产前建立基因型-表型关系。基于三亲的 WES 可以辅助骨骼异常胎儿的产前诊断和遗传咨询。

相似文献

1
Prenatal trio-based whole exome sequencing in fetuses with abnormalities of the skeletal system.胎儿骨骼系统畸形的产前三联体全外显子组测序。
Mol Genet Genomics. 2022 Jul;297(4):1017-1026. doi: 10.1007/s00438-022-01899-x. Epub 2022 May 18.
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Prenatal exome sequencing analysis in fetal structural anomalies detected by ultrasonography (PAGE): a cohort study.超声检查发现胎儿结构畸形的产前外显子组测序分析(PAGE):一项队列研究。
Lancet. 2019 Feb 23;393(10173):747-757. doi: 10.1016/S0140-6736(18)31940-8. Epub 2019 Jan 31.
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Utility of trio-based prenatal exome sequencing incorporating splice-site and mitochondrial genome assessment in pregnancies with fetal ultrasound anomalies: prospective cohort study.基于三探针的产前外显子组测序结合剪接位点和线粒体基因组评估在胎儿超声异常妊娠中的应用:前瞻性队列研究。
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Whole-exome sequencing in the evaluation of fetal structural anomalies: a prospective cohort study.全外显子组测序在胎儿结构畸形评估中的应用:一项前瞻性队列研究。
Lancet. 2019 Feb 23;393(10173):758-767. doi: 10.1016/S0140-6736(18)32042-7. Epub 2019 Jan 31.
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Prenatal whole-exome sequencing for fetal structural anomalies: a retrospective analysis of 145 Chinese cases.胎儿结构畸形的产前全外显子组测序:145 例中国病例的回顾性分析。
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Whole-exome sequencing in deceased fetuses with ultrasound anomalies: a retrospective analysis.对超声异常的死胎进行全外显子组测序:一项回顾性分析。
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Whole-exome sequencing on deceased fetuses with ultrasound anomalies: expanding our knowledge of genetic disease during fetal development.对存在超声异常的死胎进行全外显子组测序:在胎儿发育过程中扩展我们对遗传疾病的认识。
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Molecular diagnostic yield of exome sequencing in a Chinese cohort of 512 fetuses with anomalies.外显子组测序在中国 512 例畸形胎儿队列中的分子诊断产出率。
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Application of exome sequencing for prenatal diagnosis of fetal structural anomalies: clinical experience and lessons learned from a cohort of 1618 fetuses.外显子组测序在胎儿结构畸形产前诊断中的应用:1618 例胎儿队列的临床经验和教训。
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Family history is key to the interpretation of exome sequencing in the prenatal context: unexpected diagnosis of Basal Cell Nevus Syndrome.家族史是产前外显子测序解释的关键:意外诊断出基底细胞痣综合征。
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Exome sequencing and prenatal skeletal abnormalities: comprehensive review and meta-analysis and way forward.外显子组测序与产前骨骼异常:综合综述、荟萃分析及未来方向
Front Genet. 2025 Jun 11;16:1502538. doi: 10.3389/fgene.2025.1502538. eCollection 2025.
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A Mutation in the Gene Leading to Severe Osteogenesis Imperfecta: Case Report and Review of the Literature.导致严重成骨不全症的基因中的一种突变:病例报告及文献综述
AJP Rep. 2024 Sep 12;14(3):e215-e223. doi: 10.1055/a-2388-3190. eCollection 2024 Jul.
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Prenatal diagnosis of fetuses with ultrasound anomalies by whole-exome sequencing in Luoyang city, China.

本文引用的文献

1
Two novel mutations of COL1A1 in fetal genetic skeletal dysplasia of Chinese.COL1A1 基因中的两个新型突变与中国胎儿遗传性骨骼发育不良相关。
Mol Genet Genomic Med. 2020 Mar;8(3):e1105. doi: 10.1002/mgg3.1105. Epub 2020 Jan 3.
中国洛阳市通过全外显子组测序对超声异常胎儿进行产前诊断。
Front Genet. 2024 Jan 22;14:1301439. doi: 10.3389/fgene.2023.1301439. eCollection 2023.
4
Diagnostic Yield of Exome Sequencing in Fetuses with Sonographic Features of Skeletal Dysplasias but Normal Karyotype or Chromosomal Microarray Analysis: A Systematic Review.超声检查具有骨骼发育不良特征但核型或染色体微阵列分析正常的胎儿中外显子组测序的诊断效果:系统评价。
Genes (Basel). 2023 May 30;14(6):1203. doi: 10.3390/genes14061203.
5
Implementation of Exome Sequencing in Prenatal Diagnostics: Chances and Challenges.外显子组测序在产前诊断中的应用:机遇与挑战
Diagnostics (Basel). 2023 Feb 23;13(5):860. doi: 10.3390/diagnostics13050860.