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基于选择、截断和荧光偏振的青霉菌 aptasensor 检测。

Selection, truncation and fluorescence polarization based aptasensor for Weissella viridescens detection.

机构信息

State Key Laboratory of Food Science and Technology, School of Food Science and Technology Jiangnan University, Wuxi, 214122, China; National Engineering Research Center for Functional Food, Jiangnan University, Wuxi, 214122, China; International Joint Laboratory on Food Safety, Jiangnan University, Wuxi, 214122, China.

School of Grain Science and Technology, Jiangsu University of Science and Technology, Zhenjiang, 212100, China.

出版信息

Talanta. 2022 Aug 15;246:123499. doi: 10.1016/j.talanta.2022.123499. Epub 2022 Apr 21.

Abstract

Weissella viridescens is a spoilage bacterium commonly found in low-temperature meat products. In this work, after fifteen rounds including three counter selection rounds of whole-cell systemic evolution of ligands by exponential enrichment (SELEX) in vitro, a novel aptamer L3 that can specifically recognize W. viridescens was obtained with a dissociation constant (K) value of 68.25 ± 5.32 nM. The sequence of aptamer L3 was optimized by truncation and a new aptamer sequence TL43 was obtained with a lower K value of 32.11 ± 3.01 nM. Finally, a simple and rapid fluorescence polarization (FP) platform was constructed to detect W. viridescens, in which FAM-labeled complementary sequence (FAM-cDNA) was employed to generate FP signal and streptavidin was used to amplify FP signal. In the presence of target bacteria, FP value decreased owning to the dissociation of FAM-cDNA from streptavidin/biotin-TL43/FAM-cDNA complex. Under optimal conditions, the concentration of W. viridescens and FP value displayed a good linear relationship with the detection range from 10 to 10 cfu/mL. Moreover, the designed detection system had a good recovery rate of 90.6%-107.7% in smoked ham samples compared with classical plate counting method, indicating the great potential of the selected and truncated aptamer in practical biosensing applications.

摘要

青霉菌是一种常见的低温肉制品腐败菌。本研究经过十五轮包括三轮体外全细胞系统进化配体指数富集(SELEX)的筛选,得到了一种能特异性识别青霉菌的新型适体 L3,其解离常数(K)值为 68.25±5.32 nM。通过截短对适体 L3 的序列进行优化,得到了 K 值为 32.11±3.01 nM 的新适体序列 TL43。最后,构建了一种简单快速的荧光偏振(FP)检测平台来检测青霉菌,该平台使用 FAM 标记的互补序列(FAM-cDNA)产生 FP 信号,并用链霉亲和素来放大 FP 信号。在存在目标细菌的情况下,由于 FAM-cDNA 从链霉亲和素/生物素-TL43/FAM-cDNA 复合物中解离,FP 值降低。在最佳条件下,青霉菌的浓度与 FP 值呈良好的线性关系,检测范围为 10 至 10 cfu/mL。此外,与经典平板计数法相比,该设计的检测系统在熏火腿样品中的回收率为 90.6%-107.7%,表明所选和截短适体在实际生物传感应用中具有很大的潜力。

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