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基因表达网络与蜥蜴肌肉收缩生理学差异的关系。

Relationship between gene expression networks and muscle contractile physiology differences in Anolis lizards.

机构信息

Department of Biology, University of South Dakota, Vermillion, SD, USA.

Sanford School of Medicine, University of South Dakota, Vermillion, SD, USA.

出版信息

J Comp Physiol B. 2022 Jul;192(3-4):489-499. doi: 10.1007/s00360-022-01441-w. Epub 2022 May 20.

Abstract

Muscles facilitate most animal behavior, from eating to fleeing. However, to generate the variation in behavior necessary for survival, different muscles must perform differently; for instance, sprinting requires multiple rapid muscle contractions, whereas biting may require fewer contractions but greater force. Here, we use a transcriptomic approach to identify genes associated with variation in muscle contractile physiology among different muscles from the same individual. We measured differential gene expression between a leg and jaw muscle of Anolis lizards known to differ in muscle contractile physiology and performance. For each individual, one muscle was used to measure muscle contractile physiology, including contractile velocity (V and V), specific tension, power ratio, and twitch time, whereas the contralateral muscle was used to extract RNA for transcriptomic sequencing. Using the transcriptomic data, we found clear clustering of muscle type. Expression of genes clustered in gene ontology (GO) terms related to muscle contraction and extracellular matrix was, on average, negatively correlated with V and slower twitch times but positively correlated to power ratio and V. Conversely, genes related to the GO terms related to aerobic respiration were downregulated in muscles with higher power ratio and V, and over-expressed as twitch time decreased. Determining the molecular mechanisms that underlie variation in muscle contractile physiology can begin to explain how organisms are able to optimize behavior under variable conditions. Future studies pursuing the effects of differential gene expression across muscle types in different environments might inform researchers about how differences develop across species, populations, and individuals varying in ecological history.

摘要

肌肉促进了大多数动物的行为,从进食到逃避。然而,为了产生生存所需的行为变化,不同的肌肉必须表现出不同的功能;例如,短跑需要多次快速肌肉收缩,而咬可能需要较少的收缩但更大的力。在这里,我们使用转录组学方法来鉴定与来自同一个体的不同肌肉的肌肉收缩生理变化相关的基因。我们测量了已知在肌肉收缩生理和性能上存在差异的蜥蜴腿肌和颌肌之间的差异基因表达。对于每个个体,一条肌肉用于测量肌肉收缩生理,包括收缩速度(V 和 V)、比张力、功率比和抽搐时间,而对侧肌肉用于提取 RNA 进行转录组测序。利用转录组数据,我们发现肌肉类型的聚类非常明显。GO 术语中与肌肉收缩和细胞外基质相关的基因表达簇平均与 V 和较慢的抽搐时间呈负相关,但与功率比和 V 呈正相关。相反,与有氧呼吸相关的 GO 术语相关的基因在功率比和 V 较高的肌肉中下调,并且随着抽搐时间的减少而过度表达。确定肌肉收缩生理变化的分子机制可以开始解释生物体如何在可变条件下优化行为。未来研究在不同环境中不同肌肉类型之间的差异基因表达的影响可能会为研究人员提供有关如何在不同生态历史的物种、种群和个体中发展差异的信息。

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