Department of Statistics and Finance, University of Science and Technology of China, China.
Genmab US, Inc, United States.
Comput Biol Chem. 2022 Aug;99:107697. doi: 10.1016/j.compbiolchem.2022.107697. Epub 2022 May 23.
The naïve empirical Bayes method has been widely used as an ad hoc tool in fitting linear mixed-effect models, which is much computationally efficient than the maximum likelihood estimation method. However, the shrinkage effect of the empirical Bayes method causes bias in the estimates of the fixed effects. Bias-correction has been proposed for the mixed-effects model when only one covariate is present. In this paper, we derive the shrinkage factor of the empirical Bayes predictors of the random effects and the variance-covariance matrix of the corrected estimates when the model has more than one covariate. The empirical Bayes estimates and test statistics are then corrected using the derived factor. Theoretical derivations, simulation studies and a real data application demonstrate the validity of the proposed method in that the corrected estimates are unbiased and the corrected tests have correct p-values.
天真经验贝叶斯方法已被广泛用作拟合线性混合效应模型的一种特别工具,其计算效率比最大似然估计方法高得多。然而,经验贝叶斯方法的收缩效应会导致固定效应估计值出现偏差。当只有一个协变量时,已经提出了混合效应模型的偏差校正方法。在本文中,当模型具有多个协变量时,我们推导出了随机效应的经验贝叶斯预测器的收缩因子以及校正估计值的方差-协方差矩阵。然后使用推导出的因子校正经验贝叶斯估计值和检验统计量。理论推导、模拟研究和实际数据应用表明了所提出方法的有效性,即校正后的估计值是无偏的,校正后的检验具有正确的 p 值。