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基于多重 PCR 的三种夜蛾和一种螟蛾(鳞翅目:夜蛾科)幼虫同时诊断方法的开发。

Development of Multiplex PCR-based Protocols for Simultaneous Caterpillar Diagnosis of Three Spodoptera and One Mamestra Species (Lepidoptera: Noctuidae).

机构信息

Department of Agricultural Biotechnology, Seoul National University, 08826, Seoul, Republic of Korea.

Program of Applied Biology, College of Agriculture and Life Sciences, Kangwon National University, 24341, Chuncheon, Republic of Korea.

出版信息

J Econ Entomol. 2022 Oct 12;115(5):1703-1711. doi: 10.1093/jee/toac076.

Abstract

Since many noctuid moth species are highly destructive crop pests, it is essential to establish proper management strategies, which primarily require accurate and rapid species identification. However, diagnosis of noctuid species in the field, particularly at the larval stage, is very difficult due to their morphological similarity and individual color variation. In particular, caterpillars of Spodoptera exigua (Hübner), Spodoptera litura (Fabricius), Spodoptera frugiperda (Smith), and Mamestra brassicae (L.) (Lepidoptera: Noctuidae) are hard to be identified by morphology and frequently found on the same host crops in the same season, thus requiring a reliable species diagnosis method. To efficiently diagnose these species, we identified species-specific internal transcribed spacer 1 (ITS1) sequences and developed two molecular species diagnosis protocols using ITS1 markers. The first protocol was multiplex conventional PCR in conjunction with subsequent gel electrophoresis for species identification based on amplicon size. The second protocol was based on multiplex real-time PCR using fluorescent dye-labeled primers for single-step diagnosis. Template genomic DNA (gDNA) prepared by the DNA release method was also suitable for both protocols as the template prepared by DNA extraction. The two protocols enabled rapid and robust species diagnosis using a single multiplex PCR step. Depending on laboratory instrumentation, one of the two protocols can be easily adapted for species diagnosis of the four noctuid caterpillars in the field, which is essential for establishing proper management strategies. The multiplex real-time PCR protocol, in particular, will facilitate accurate diagnosis of the four species in a single step regardless of template gDNA quality.

摘要

由于许多夜蛾科的物种都是高度破坏性的作物害虫,因此建立适当的管理策略至关重要,而这主要需要准确和快速的物种鉴定。然而,由于它们的形态相似性和个体颜色变化,在野外,特别是在幼虫阶段,对夜蛾物种的诊断非常困难。特别是,小菜蛾(Hübner)、斜纹夜蛾(Fabricius)、草地贪夜蛾(Smith)和菜蛾(Lepidoptera: Noctuidae)的幼虫很难通过形态学进行鉴定,并且在同一季节经常在同一宿主作物上发现,因此需要一种可靠的物种诊断方法。为了有效地诊断这些物种,我们鉴定了物种特异性的内转录间隔区 1(ITS1)序列,并使用 ITS1 标记开发了两种分子物种诊断方案。第一种方案是基于扩增子大小的多重常规 PCR 结合随后的凝胶电泳进行物种鉴定。第二种方案是基于使用荧光染料标记引物的多重实时 PCR 进行一步诊断。通过 DNA 释放法制备的模板基因组 DNA(gDNA)也适用于两种方案,因为通过 DNA 提取制备的模板也适用于两种方案。这两种方案可以通过单个多重 PCR 步骤实现快速而稳健的物种诊断。根据实验室仪器设备的不同,两种方案中的一种可以很容易地适应野外四种夜蛾幼虫的物种诊断,这对于建立适当的管理策略至关重要。特别是多重实时 PCR 方案,无论模板 gDNA 质量如何,都可以方便地一步准确诊断这四种物种。

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