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鉴定出非综合征性先天性无牙症的 KDF1 基因中的一种新型错义杂合突变。

Identification of a novel missense heterozygous mutation in the KDF1 gene for non-syndromic congenital anodontia.

机构信息

School of Stomatology, Nanfang Hospital, Southern Medical University, Guangzhou, 510515, China.

Genetic and Metabolic Central Laboratory, Birth Defects Prevention and Control Institute, Maternal and Child Health Hospital of Guangxi Zhuang Autonomous Region, Nanning, 530000, China.

出版信息

Clin Oral Investig. 2022 Aug;26(8):5171-5179. doi: 10.1007/s00784-022-04485-y. Epub 2022 May 31.

DOI:10.1007/s00784-022-04485-y
PMID:35641834
Abstract

OBJECTIVES

KDF1 is a recently identified gene related to tooth development, but it has been little studied. To date, only three cases have been reported in which KDF1 mutations are related to tooth development, including two ectodermal dysplasia cases accompanied by tooth loss and one non-syndromic case with tooth agenesis. However, no KDF1 mutations have been reported as associated with non-syndromic anodontia. Here, the aim was to investigate the genetic etiology of this condition and explore the functional role of a novel KDF1 mutation in a Chinese patient with non-syndromic anodontia.

MATERIALS AND METHODS

Pathogenic variants were identified by whole-exome and Sanger sequencing. Meanwhile, we conducted a literature review of the reported KDF1 mutations and performed an in vitro functional analysis of four anodontia-causing KDF1 mutations (one novel and three known).

RESULTS

We identified a novel de novo missense mutation (c.911 T > A, p.I304N) in the KDF1 gene in a Chinese patient with severe non-syndromic anodontia. In vitro functional studies showed altered mRNA and protein expression levels of the mutant KDF1.

CONCLUSIONS

Our results are the first report of KDF1 missense mutation causing non-syndromic anodontia.

CLINICAL RELEVANCE

This study not only further supports the important role of KDF1 in non-syndromic congenital anodontia, but also expands the spectrum of KDF1 mutations and will contribute to the genetic diagnosis and counselling of families with anodontia.

摘要

目的

KDF1 是一个最近发现的与牙齿发育相关的基因,但研究较少。迄今为止,仅有 3 例报道 KDF1 突变与牙齿发育有关,包括 2 例伴有牙齿缺失的外胚层发育不良病例和 1 例无综合征病例伴牙齿缺失。然而,尚未有 KDF1 突变与非综合征性无牙症相关的报道。本研究旨在探讨该疾病的遗传病因,并研究 1 例中国非综合征性无牙症患者中新型 KDF1 突变的功能作用。

材料与方法

通过全外显子组和 Sanger 测序鉴定致病性变异。同时,我们对报道的 KDF1 突变进行了文献复习,并对 4 种导致无牙症的 KDF1 突变(1 种新突变和 3 种已知突变)进行了体外功能分析。

结果

我们在一名严重非综合征性无牙症的中国患者中发现了 KDF1 基因中的一个新的错义突变(c.911T > A,p.I304N)。体外功能研究显示突变型 KDF1 的 mRNA 和蛋白表达水平发生改变。

结论

我们的研究结果首次报道了 KDF1 错义突变导致非综合征性无牙症。

临床意义

该研究不仅进一步支持 KDF1 在非综合征性先天性无牙症中的重要作用,而且扩大了 KDF1 突变谱,将有助于无牙症患者的遗传诊断和咨询。

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Clin Oral Investig. 2022 Aug;26(8):5171-5179. doi: 10.1007/s00784-022-04485-y. Epub 2022 May 31.
2
KDF1 is a novel candidate gene of non-syndromic tooth agenesis.KDF1 是一种非综合征性牙齿缺失的新候选基因。
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Main genetic entities associated with tooth agenesis.与牙齿发育不全相关的主要遗传实体。
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KDF1 promotes ameloblast differentiation by inhibiting the IKK/IκB/NF-κB axis.KDF1通过抑制IKK/IκB/NF-κB轴促进成釉细胞分化。

本文引用的文献

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Rare phenotype: Hand preaxial polydactyly associated with LRP6-related tooth agenesis in humans.罕见表型:人类中与LRP6相关牙齿发育不全相关的手部轴前多指畸形。
NPJ Genom Med. 2021 Nov 10;6(1):93. doi: 10.1038/s41525-021-00262-0.
2
TAB2 Promotes the Stemness and Biological Functions of Cervical Squamous Cell Carcinoma Cells.TAB2促进宫颈鳞状细胞癌细胞的干性和生物学功能。
Stem Cells Int. 2021 Jun 30;2021:6550388. doi: 10.1155/2021/6550388. eCollection 2021.
3
KDF1, a Novel Tumor Suppressor in Clear Cell Renal Cell Carcinoma.KDF1,一种透明细胞肾细胞癌中的新型肿瘤抑制因子。
J Cell Physiol. 2024 Dec;239(12):e31437. doi: 10.1002/jcp.31437. Epub 2024 Sep 19.
4
KDF1 Promoted Proliferation, Migration and Invasion of Lung Adenocarcinoma Cells through Activating STAT3 and AKT Pathway.KDF1通过激活STAT3和AKT信号通路促进肺腺癌细胞的增殖、迁移和侵袭。
Biomedicines. 2023 Dec 1;11(12):3194. doi: 10.3390/biomedicines11123194.
5
Enamel Structure Defects in Missense Mutation Knock-in Mice.错义突变敲入小鼠的釉质结构缺陷
Biomedicines. 2023 Feb 7;11(2):482. doi: 10.3390/biomedicines11020482.
Front Oncol. 2021 May 31;11:686678. doi: 10.3389/fonc.2021.686678. eCollection 2021.
4
Functional studies for a dominant mutation in the EDAR gene responsible for hypohidrotic ectodermal dysplasia.功能性研究一个导致少汗型外胚层发育不全的显性突变的 EDAR 基因。
J Dermatol. 2019 Aug;46(8):710-715. doi: 10.1111/1346-8138.14983. Epub 2019 Jun 27.
5
KDF1 is a novel candidate gene of non-syndromic tooth agenesis.KDF1 是一种非综合征性牙齿缺失的新候选基因。
Arch Oral Biol. 2019 Jan;97:131-136. doi: 10.1016/j.archoralbio.2018.10.025. Epub 2018 Oct 23.
6
A review on non-syndromic tooth agenesis associated with mutations.关于与突变相关的非综合征性牙齿发育不全的综述
Jpn Dent Sci Rev. 2018 Feb;54(1):30-36. doi: 10.1016/j.jdsr.2017.08.001. Epub 2017 Oct 7.
7
KDF1, encoding keratinocyte differentiation factor 1, is mutated in a multigenerational family with ectodermal dysplasia.KDF1,编码角蛋白细胞分化因子 1,在一个具有外胚层发育不良的多代家族中发生突变。
Hum Genet. 2017 Jan;136(1):99-105. doi: 10.1007/s00439-016-1741-z. Epub 2016 Nov 12.
8
Mutation analysis by direct and whole exome sequencing in familial and sporadic tooth agenesis.通过直接测序和全外显子组测序对家族性和散发性牙齿发育不全进行突变分析。
Int J Mol Med. 2016 Nov;38(5):1338-1348. doi: 10.3892/ijmm.2016.2742. Epub 2016 Sep 19.
9
Forward genetics identifies Kdf1/1810019J16Rik as an essential regulator of the proliferation-differentiation decision in epidermal progenitor cells.正向遗传学鉴定出 Kdf1/1810019J16Rik 是表皮祖细胞增殖-分化决策的必需调控因子。
Dev Biol. 2013 Nov 15;383(2):201-13. doi: 10.1016/j.ydbio.2013.09.022. Epub 2013 Sep 25.
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Mutations in WNT10A are present in more than half of isolated hypodontia cases.WNT10A 基因突变存在于超过一半的孤立性缺牙病例中。
J Med Genet. 2012 May;49(5):327-31. doi: 10.1136/jmedgenet-2012-100750.