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马拉色菌属 arunalokei 的基因组及其在面部皮肤的分布。

Genome of Malassezia arunalokei and Its Distribution on Facial Skin.

机构信息

School of Biological Sciences and Research Institute of Basic Sciences, Seoul National University, Seoul, South Korea.

Department of Systems Biotechnology, Chung-Ang Universitygrid.254224.7, Anseong, South Korea.

出版信息

Microbiol Spectr. 2022 Jun 29;10(3):e0050622. doi: 10.1128/spectrum.00506-22. Epub 2022 Jun 1.

Abstract

is a fungal genus found on the skin of humans and warm-blooded animals, with 18 species reported to date. In this study, we sequenced and annotated the genome of Malassezia arunalokei, which is the most recently identified species, and compared it with Malassezia restricta, the predominant isolate from human skin. Additionally, we reanalyzed previously reported mycobiome data sets with a species-level resolution to investigate distribution within the mycobiota of human facial skin. We discovered that the genome is 7.24 Mbp in size and encodes 4,117 protein-coding genes, all of which were clustered with M. restricta. We also found that the average nucleotide identity value of the genome was 93.5, compared with the genomes of three strains, including KCTC 27527. Our findings demonstrate that they indeed belong to different species and that may have experienced specific gene loss events during speciation. Furthermore, our study showed that was diverged from approximately 7.1 million years ago and indicated that is the most recently diverged species in the lineage to date. Finally, our analysis of the facial mycobiome of previously recruited cohorts revealed that abundance is not associated with seborrheic dermatitis/dandruff or acne, but was revealed to be more abundant on the forehead and cheek than on the scalp. is the fungus predominantly residing on the human skin and causes various skin diseases, including seborrheic dermatitis and dandruff. To date, 18 species have been reported, and among them, is the most predominant on human skin, especially on the scalp. In this study, we sequenced and analyzed the genome of , which is the most recently identified species, and compared it with . Moreover, we analyzed the fungal microbiome to investigate the distribution on human facial skin. We found that may have experienced specific gene loss events during speciation. Our study also showed that was diverged from approximately 7.1 million years ago and indicated that is the most recently diverged species in the lineage. Finally, our analysis of the facial mycobiome revealed that has higher relative abundance on the forehead and cheek than the scalp.

摘要

马拉色菌属是一种在人类和温血动物皮肤上发现的真菌属,迄今为止已报告有 18 种。在这项研究中,我们对最近鉴定的马拉色菌属种 Malassezia arunalokei 进行了测序和注释,并将其与人体皮肤主要分离株 Malassezia restricta 进行了比较。此外,我们还重新分析了以前报道的具有种水平分辨率的微生物组数据集,以研究其在人体面部皮肤微生物组中的分布。我们发现,该基因组大小为 7.24 Mbp,编码 4117 个蛋白质编码基因,所有这些基因都与 M. restricta 聚类。我们还发现,该基因组的平均核苷酸同一性值与包括 KCTC 27527 在内的三个菌株的基因组相比为 93.5。我们的研究结果表明,它们确实属于不同的种,并且在物种形成过程中可能经历了特定的基因丢失事件。此外,我们的研究表明,该种大约在 710 万年前与 M. restricta 分离,表明它是迄今为止马拉色菌属中分化程度最高的种。最后,我们对以前招募的队列的面部微生物组进行分析,结果表明,丰度与脂溢性皮炎/头皮屑或痤疮无关,但在额头和脸颊上比在头皮上更为丰富。马拉色菌是一种主要存在于人类皮肤上的真菌,可引起各种皮肤疾病,包括脂溢性皮炎和头皮屑。迄今为止,已报告了 18 种,其中,在人体皮肤上最主要的是 M. restricta,尤其是在头皮上。在这项研究中,我们对最近鉴定的种 Malassezia arunalokei 进行了测序和分析,并与 M. restricta 进行了比较。此外,我们还分析了真菌微生物组,以研究其在人类面部皮肤中的分布。我们发现,在物种形成过程中,可能经历了特定的基因丢失事件。我们的研究还表明,M. arunalokei 大约在 710 万年前与 M. restricta 分离,这表明它是马拉色菌属中分化程度最高的种。最后,我们对面部微生物组的分析表明,在额头和脸颊上的相对丰度高于头皮。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/387a/9241646/39231df0c62c/spectrum.00506-22-f001.jpg

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