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蛋白质组学分析不育/可育系百合花药发育差异

Proteomic analysis of differential anther development from sterile/fertile lines in L.

机构信息

College of Horticulture, Xinjiang Agricultural University, Urumqi, China.

Institute of Horticulture Crops, Ningxia Academy of Agriculture and Forestry Sciences, Yinchuan, China.

出版信息

PeerJ. 2022 May 27;10:e13168. doi: 10.7717/peerj.13168. eCollection 2022.

Abstract

BACKGROUND

Pepper ( L.) is a major cash crop throughout the world. Male sterility is an important characteristic in crop species that leads to a failure to produce functional pollen, and it has crucial roles in agricultural breeding and the utilization of heterosis.

OBJECTIVES

In this study, we identified many crucial factors and important components in metabolic pathways in anther and pollen development, and elucidated the molecular mechanism related to pollen abortion in pepper.

METHODS

Pepper pollen was observed at different stages to detect the characteristics associated with male sterility and fertility. The phytohormone and oxidoreductase activities were detected in spectrophotometric and redox reaction assays, respectively. Proteins were extracted from male sterile and fertile pepper lines, and identified by TMT/iTRAQ (tandem mass tags/isobaric tags for relative and absolute quantitation) and LC-MS/MS (liquid chromatograph-mass spectrometer) analysis. Differentially abundant proteins (DAPs) were analyzed based on Gene Ontology annotations and the Kyoto Encyclopedia of Genes and Genomes database according to |fold change)| > 1.3 and value < 0.05. DAPs were quantified in the meiosis, tetrad, and binucleate stages by parallel reaction monitoring (PRM).

RESULTS

In this study, we screened and identified one male sterile pepper line with abnormal cytological characteristics in terms of pollen development. The peroxidase and catalase enzyme activities were significantly reduced and increased, respectively, in the male sterile line compared with the male fertile line. Phytohormone analysis demonstrated that the gibberellin, jasmonic acid, and auxin contents changed by different extents in the male sterile pepper line. Proteome analysis screened 1,645 DAPs in six clusters, which were mainly associated with the chloroplast and cytoplasm based on their similar expression levels. According to proteome analysis, 45 DAPs were quantitatively identified in the meiosis, tetrad, and binucleate stages by PRM, which were related to monoterpenoid biosynthesis, and starch and sucrose metabolism pathways.

CONCLUSIONS

We screened 1,645 DAPs by proteomic analysis and 45 DAPs were related to anther and pollen development in a male sterile pepper line. In addition, the activities of peroxidase and catalase as well as the abundances of phytohormones such as gibberellin, jasmonic acid, and auxin were related to male sterility. The results obtained in this study provide insights into the molecular mechanism responsible for male sterility and fertility in pepper.

摘要

背景

辣椒(L.)是世界范围内的主要经济作物。雄性不育是作物物种中的一个重要特征,导致其无法产生功能花粉,它在农业育种和杂种优势利用中具有关键作用。

目的

本研究鉴定了花药和花粉发育过程中代谢途径中的许多关键因素和重要组成部分,并阐明了辣椒花粉败育相关的分子机制。

方法

观察不同阶段的辣椒花粉,以检测与雄性不育和可育相关的特征。分别通过分光光度法和氧化还原反应测定法检测植物激素和氧化还原酶的活性。从雄性不育和可育的辣椒品系中提取蛋白质,通过 TMT/iTRAQ(串联质量标签/相对和绝对定量同位素标记)和 LC-MS/MS(液相色谱-质谱联用)分析进行鉴定。根据 |fold change)| > 1.3 和 value < 0.05,基于基因本体注释和京都基因与基因组百科全书数据库对差异丰度蛋白(DAP)进行分析。通过平行反应监测(PRM)定量分析减数分裂、四分体和双核期的 DAPs。

结果

本研究筛选并鉴定了一个花粉发育异常的雄性不育辣椒品系。与可育系相比,雄性不育系的过氧化物酶和过氧化氢酶活性显著降低和升高。植物激素分析表明,雄性不育辣椒品系中赤霉素、茉莉酸和生长素的含量有不同程度的变化。蛋白质组分析筛选出 6 个聚类的 1645 个 DAPs,根据其相似的表达水平,主要与叶绿体和细胞质相关。根据蛋白质组分析,通过 PRM 在减数分裂、四分体和双核期定量鉴定了 45 个 DAPs,这些 DAPs与单萜类生物合成以及淀粉和蔗糖代谢途径有关。

结论

通过蛋白质组分析筛选出 1645 个 DAPs,在雄性不育辣椒品系中鉴定出与花药和花粉发育相关的 45 个 DAPs。此外,过氧化物酶和过氧化氢酶的活性以及赤霉素、茉莉酸和生长素等植物激素的丰度与雄性不育有关。本研究获得的结果为辣椒雄性不育和可育的分子机制提供了新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1f6/9150696/3181093bdba8/peerj-10-13168-g001.jpg

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