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血浆锌的全基因组 DNA 甲基化特征及其在锌与肺癌风险关联中的中介作用。

Epigenome-wide DNA methylation signature of plasma zinc and their mediation roles in the association of zinc with lung cancer risk.

机构信息

Department of Occupational and Environmental Health, Key Laboratory of Environment & Health, Ministry of Education, State Key Laboratory of Environmental Health (Incubating), School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China.

Department of Occupational and Environmental Health, Key Laboratory of Environment & Health, Ministry of Education, State Key Laboratory of Environmental Health (Incubating), School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China; Beijing Obstetrics and Gynecology Hospital, Capital Medical University, Beijing, China.

出版信息

Environ Pollut. 2022 Aug 15;307:119563. doi: 10.1016/j.envpol.2022.119563. Epub 2022 May 30.

Abstract

Essential trace element zinc is associated with decreased lung cancer risk, but underlying mechanisms remain unclear. This study aimed to investigate role of DNA methylation in zinc-lung cancer association. We conducted a case-cohort study within prospective Dongfeng-Tongji cohort, including 359 incident lung cancer cases and a randomly selected sub-cohort of 1399 participants. Epigenome-wide association study (EWAS) was used to examine association of plasma zinc with DNA methylation in peripheral blood. For the zinc-related CpGs, their mediation effects on zinc-lung cancer association were assessed; their diagnostic performance for lung cancer was testified in the case-cohort study and further validated in another 126 pairs of lung cancer case-control study. We identified 28 CpGs associated with plasma zinc at P < 1.0 × 10 and seven of them (cg07077080, cg01077808, cg17749033, cg15554270, cg26125625, cg10669424, and cg15409013 annotated to GSR, CALR3, SLC16A3, PHLPP2, SLC12A8, VGLL4, and ADAMTS16, respectively) were associated with incident risk of lung cancer. Moreover, the above seven CpGs were differently methylated between 126 pairs of lung cancer and adjacent normal lung tissues and had the same directions with EWAS of zinc. They could mediate a separate 7.05%∼22.65% and a joint 29.42% of zinc-lung cancer association. Compared to using traditional factors, addition of methylation risk score exerted improved discriminations for lung cancer both in case-cohort study [area under the curve (AUC) = 0.818 vs. 0.738] and in case-control study (AUC = 0.816 vs. 0.646). Our results provide new insights for the biological role of DNA methylation in the inverse association of zinc with incident lung cancer.

摘要

必需微量元素锌与肺癌风险降低有关,但潜在机制尚不清楚。本研究旨在探讨 DNA 甲基化在锌与肺癌关联中的作用。我们在前瞻性东风-同济队列中开展了病例-对照研究,包括 359 例肺癌新发病例和 1399 名随机选择的亚队列参与者。采用全基因组关联研究(EWAS)检测血浆锌与外周血 DNA 甲基化的关联。对于与锌相关的 CpG,评估其对锌与肺癌关联的中介效应;在病例-对照研究中检验其对肺癌的诊断性能,并在另一项 126 对肺癌病例对照研究中进一步验证。我们确定了 28 个与血浆锌相关的 CpG(P<1.0×10-8),其中 7 个(cg07077080、cg01077808、cg17749033、cg15554270、cg26125625、cg10669424 和 cg15409013 分别注释为 GSR、CALR3、SLC16A3、PHLPP2、SLC12A8、VGLL4 和 ADAMTS16)与肺癌发病风险相关。此外,这 7 个 CpG 在 126 对肺癌和相邻正常肺组织中存在不同的甲基化,与锌的 EWAS 方向相同。它们可以分别介导锌与肺癌关联的 7.05%∼22.65%和 29.42%的独立部分。与使用传统因素相比,添加甲基化风险评分可提高病例-对照研究中(AUC=0.818 对 0.738)和病例对照研究中(AUC=0.816 对 0.646)对肺癌的判别能力。我们的研究结果为 DNA 甲基化在锌与肺癌负相关中的生物学作用提供了新的见解。

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