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寻找可靠的旋光法和准确预测 (s)-甲氧环氧乙烷和 (1R,5R)-β-蒎烯的方法。

Finding reliable methodology for optical rotation and correct predictions of (s)-methyloxirane and (1R,5R)-β-pinene.

机构信息

Department of Physical Chemistry, Institute of Chemistry, Campinas State University, Campinas, Brazil.

出版信息

Chirality. 2022 Sep;34(9):1197-1208. doi: 10.1002/chir.23479. Epub 2022 Jun 7.

DOI:10.1002/chir.23479
PMID:35670135
Abstract

Theoretical calculations of optical rotation (OR), although important to predict absolute configurations (ACs) and corroborate experiments, require efficient methodology able to reproduce enantiomer specificity and real OR values. Also, troublesome molecules are recurring in the literature, such as (S)-methyloxirane and (1R,5R)-β-pinene. This study evaluates DFT functionals B3LYP, CAM-B3LYP, ωB97X-D, M06-2X, and PBE0 considering basis sets aug-cc-pVDZ, aug-cc-pVTZ, 6-311++G(2d,p), and 6-311++G(3df,2p) in OR prediction of 42 rigid organic molecules assessing cases with wrong enantiomeric determination comparing to available experimental data at wavelengths 355, 589, and 633 nm. Functionals CAM-B3LYP and ωB97X-D with aug-cc-pVTZ are indicated here to reproduce experimental values more accurately considering fewer number of wrong AC predictions, normalized RMSD values below 0.70, and a good approximation to experimental values in hierarchical cluster analysis. Methyloxirane AC was reproduced in CAM-B3LYP and PBE0, with for CAM-B3LYP/aug-cc-pVTZ close to experimental value . Good results were found for AC of β-pinene in M06-2X, CAM-B3LYP, and ωB97X-D while the latter in 6-311++G(3df,2p) obtained OR values of and close to experimental values and . The two molecules aforementioned are, for the first time, reported to give valid theoretical OR values in such simple methodologies. OR calculations were all performed after geometry optimization at the same level of theory, and analysis of different functional combinations for each step in β-pinene showed it can interfere with AC prediction even in rigid molecules.

摘要

旋光(OR)的理论计算对于预测绝对构型(AC)和验证实验非常重要,但需要高效的方法来复制对映体特异性和实际 OR 值。此外,文献中经常出现棘手的分子,例如(S)-甲氧基环氧化物和(1R,5R)-β-蒎烯。本研究评估了 DFT 泛函 B3LYP、CAM-B3LYP、ωB97X-D、M06-2X 和 PBE0,考虑了 aug-cc-pVDZ、aug-cc-pVTZ、6-311++G(2d,p) 和 6-311++G(3df,2p) 基组,用于预测 42 个刚性有机分子的 OR,评估了在 355、589 和 633nm 波长下与可用实验数据相比,错定对映体的情况。结果表明,CAM-B3LYP 和 ωB97X-D 泛函与 aug-cc-pVTZ 结合,可以更准确地预测实验值,同时错定 AC 的预测数量较少,归一化均方根误差(RMSD)值低于 0.70,并且在层次聚类分析中与实验值的近似程度较好。CAM-B3LYP 和 PBE0 可以重现甲氧基环氧化物的 AC,CAM-B3LYP/aug-cc-pVTZ 的值与实验值 非常接近。M06-2X、CAM-B3LYP 和 ωB97X-D 对 β-蒎烯的 AC 也得到了很好的结果,而后者在 6-311++G(3df,2p) 中得到的 OR 值 和 与实验值 和 非常接近。这两种分子是首次在如此简单的方法中报告得到有效的理论 OR 值。OR 计算都是在相同理论水平下进行几何优化后进行的,并且对 β-蒎烯中每个步骤的不同功能组合进行分析表明,即使在刚性分子中,它也可能干扰 AC 预测。

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