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胚系 DDX41 变异导致髓系肿瘤的遗传特征。

The genetic landscape of germline DDX41 variants predisposing to myeloid neoplasms.

机构信息

Division of Hematopathology, Department of Pathology, University of Utah Health, Salt Lake City, UT.

Genomics Laboratory, ARUP Laboratories, Salt Lake City, UT.

出版信息

Blood. 2022 Aug 18;140(7):716-755. doi: 10.1182/blood.2021015135.

Abstract

Germline DDX41 variants are the most common mutations predisposing to acute myeloid leukemia (AML)/myelodysplastic syndrome (MDS) in adults, but the causal variant (CV) landscape and clinical spectrum of hematologic malignancies (HMs) remain unexplored. Here, we analyzed the genomic profiles of 176 patients with HM carrying 82 distinct presumably germline DDX41 variants among a group of 9821 unrelated patients. Using our proposed DDX41-specific variant classification, we identified features distinguishing 116 patients with HM with CV from 60 patients with HM with variant of uncertain significance (VUS): an older age (median 69 years), male predominance (74% in CV vs 60% in VUS, P = .03), frequent concurrent somatic DDX41 variants (79% in CV vs 5% in VUS, P < .0001), a lower somatic mutation burden (1.4 ± 0.1 in CV vs 2.9 ± 0.04 in VUS, P = .012), near exclusion of canonical recurrent genetic abnormalities including mutations in NPM1, CEBPA, and FLT3 in AML, and favorable overall survival (OS) in patients with AML/MDS. This superior OS was determined independent of blast count, abnormal karyotypes, and concurrent variants, including TP53 in patients with AML/MDS, regardless of patient's sex, age, or specific germline CV, suggesting that germline DDX41 variants define a distinct clinical entity. Furthermore, unrelated patients with myeloproliferative neoplasm and B-cell lymphoma were linked by DDX41 CV, thus expanding the known disease spectrum. This study outlines the CV landscape, expands the phenotypic spectrum in unrelated DDX41-mutated patients, and underscores the urgent need for gene-specific diagnostic and clinical management guidelines.

摘要

胚系 DDX41 变异是导致成人急性髓系白血病 (AML)/骨髓增生异常综合征 (MDS) 最常见的突变,但因果变异 (CV) 景观和血液恶性肿瘤 (HM) 的临床谱仍未得到探索。在这里,我们分析了携带 82 种不同的 DDX41 胚系变体的 176 名 HM 患者的基因组图谱,这些患者来自 9821 名无关患者中的一组。使用我们提出的 DDX41 特异性变体分类,我们确定了 116 名携带 CV 的 HM 患者与 60 名携带意义不明变异 (VUS) 的 HM 患者之间的特征区别:年龄较大 (中位数 69 岁)、男性居多 (CV 为 74%,VUS 为 60%,P =.03)、常同时存在体细胞 DDX41 变异 (CV 为 79%,VUS 为 5%,P <.0001)、体细胞突变负担较低 (CV 为 1.4 ± 0.1,VUS 为 2.9 ± 0.04,P =.012)、几乎排除了包括 AML 中的 NPM1、CEBPA 和 FLT3 突变在内的典型复发性遗传异常,以及 AML/MDS 患者的总体生存 (OS) 较好。这种优越的 OS 是独立于 AML/MDS 患者的原始细胞计数、异常核型和同时存在的变体(包括 TP53)确定的,无论患者的性别、年龄或特定的胚系 CV 如何,这表明胚系 DDX41 变体定义了一个独特的临床实体。此外,携带髓系增殖性肿瘤和 B 细胞淋巴瘤的无关患者通过 DDX41 CV 相关联,从而扩大了已知的疾病谱。本研究概述了 CV 景观,扩大了无关 DDX41 突变患者的表型谱,并强调了迫切需要制定针对基因的诊断和临床管理指南。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/31cb/9389629/01c5cd69fa4b/bloodBLD2021015135absf1.jpg

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