大规模基因表达研究揭示银屑病的转录基础:迈向精准医学方法的重要性。
Transcriptional Basis of Psoriasis from Large Scale Gene Expression Studies: The Importance of Moving towards a Precision Medicine Approach.
机构信息
Centre for Molecular Medicine and Innovative Therapeutics, Murdoch University, Discovery Way, Murdoch, WA 6150, Australia.
Perron Institute for Neurological and Translational Science, 8 Verdun Street, Nedlands, WA 6009, Australia.
出版信息
Int J Mol Sci. 2022 May 30;23(11):6130. doi: 10.3390/ijms23116130.
Transcriptome profiling techniques, such as microarrays and RNA sequencing (RNA-seq), are valuable tools for deciphering the regulatory network underlying psoriasis and have revealed large number of differentially expressed genes in lesional and non-lesional skin. Such approaches provide a more precise measurement of transcript levels and their isoforms than any other methods. Large cohort transcriptomic analyses have greatly improved our understanding of the physiological and molecular mechanisms underlying disease pathogenesis and progression. Here, we mostly review the findings of some important large scale psoriatic transcriptomic studies, and the benefits of such studies in elucidating potential therapeutic targets and biomarkers for psoriasis treatment. We also emphasised the importance of looking into the alternatively spliced RNA isoforms/transcripts in psoriasis, rather than focussing only on the gene-level annotation. The neutrophil and blood transcriptome signature in psoriasis is also briefly reviewed, as it provides the immune status information of patients and is a less invasive platform. The application of precision medicine in current management of psoriasis, by combining transcriptomic data, improves the clinical response outcome in individual patients. Drugs tailored to individual patient's genetic profile will greatly improve patient outcome and cost savings for the healthcare system.
转录组谱分析技术,如微阵列和 RNA 测序 (RNA-seq),是解析银屑病基础调控网络的有价值工具,并且已经在病变和非病变皮肤中揭示了大量差异表达的基因。这些方法比任何其他方法都能更精确地测量转录本水平及其异构体。大型队列转录组分析极大地提高了我们对疾病发病机制和进展的生理和分子机制的理解。在这里,我们主要回顾了一些重要的大规模银屑病转录组研究的发现,以及这些研究在阐明银屑病治疗的潜在治疗靶点和生物标志物方面的益处。我们还强调了研究银屑病中选择性剪接的 RNA 异构体/转录本的重要性,而不仅仅关注基因水平的注释。银屑病中的中性粒细胞和血液转录组特征也被简要回顾,因为它提供了患者的免疫状态信息,并且是一种侵入性较小的平台。通过结合转录组数据,将精准医学应用于当前的银屑病管理中,可以改善个体患者的临床反应结果。针对个体患者遗传谱定制的药物将极大地改善患者的预后并为医疗保健系统节省成本。