Department of Applied Biological Science, Tokyo University of Agriculture and Technology, Tokyo 183-8509, Japan.
Department of Environmental and Natural Resource Science, Tokyo University of Agriculture and Technology, Tokyo 183-8509, Japan.
J Struct Biol. 2022 Sep;214(3):107874. doi: 10.1016/j.jsb.2022.107874. Epub 2022 Jun 7.
An α-glucosidase from Aspergillus sojae, AsojAgdL, exhibits strong transglucosylation activity to produce α-1,6-glucosidic linkages. The most remarkable structural feature of AsojAgdL is that residues 457-560 of AsojAgdL (designated the NC sequence) is not conserved in other glycoside hydrolase family 31 enzymes, and part of this NC sequence is proteolytically cleaved during its maturation. In this study, the enzyme was expressed in Pichia pastoris, and electrophoretic analysis indicated that the recombinant enzyme, rAsojAgdL, consisted of two polypeptide chains, as observed in the case of the enzyme produced in an Aspergillus strain. The crystal structure of rAsojAgdL was determined in complex with the substrate analog trehalose. Electron density corresponding to residues 496-515 of the NC sequence was not seen, and there were no α-helices or β-strands except for a short α-helix in the structures of residues 457-495 and residues 516-560, both of which belong to the NC sequence. The residues 457-495 and the residues 516-560 both formed extra components of the catalytic domain. The residues 457-495 constituted the entrance of the catalytic pocket of rAsojAgdL, and Gly467, Asp468, Pro469, and Pro470 in the NC sequence were located within 4 Å of Trp400, a key residue involved in binding of the substrate. The results suggest that the proteolytic processing of the NC sequence is related to the formation of the catalytic pocket of AsojAgdL.
来源于米曲霉的α-葡萄糖苷酶 AsojAgdL 具有很强的转葡糖苷活性,可生成α-1,6-糖苷键。AsojAgdL 的最显著结构特征是其 457-560 位氨基酸残基(称为 NC 序列)在其他糖苷水解酶家族 31 酶中没有保守,该 NC 序列的一部分在成熟过程中被蛋白水解切割。在本研究中,该酶在毕赤酵母中表达,电泳分析表明,重组酶 rAsojAgdL 由两条多肽链组成,这与在曲霉菌株中产生的酶的情况相同。rAsojAgdL 与底物类似物海藻糖的复合物晶体结构已被确定。NC 序列的 496-515 位氨基酸残基的电子密度未被观察到,除了 457-495 位残基和 516-560 位残基的结构中存在一个短的α-螺旋外,没有α-螺旋或β-折叠,这两个结构都属于 NC 序列。457-495 位残基和 516-560 位残基都形成了催化结构域的额外组件。457-495 位残基构成了 rAsojAgdL 催化口袋的入口,NC 序列中的 Gly467、Asp468、Pro469 和 Pro470 位于与底物结合关键残基 Trp400 相距 4 Å 的位置。结果表明,NC 序列的蛋白水解加工与 AsojAgdL 催化口袋的形成有关。