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通过工程化 Lysobacter enzymogenes 中的 HSAF 生物合成基因合成奇数碳不饱和脂肪酸二羧酸。

Biosynthesis of Odd-Carbon Unsaturated Fatty Dicarboxylic Acids Through Engineering the HSAF Biosynthetic Gene in Lysobacter enzymogenes.

机构信息

Department of Chemistry, University of Nebraska-Lincoln, Lincoln, NE, 68588-0304, USA.

出版信息

Mol Biotechnol. 2022 Dec;64(12):1401-1408. doi: 10.1007/s12033-022-00520-1. Epub 2022 Jun 14.

Abstract

Fatty dicarboxylic acids (FDCA) are useful as starting materials or components for plastics, polyesters, nylons, and fragrances. Most of the commercially available FDCA contain an even number of carbons, and there remain few sustainable methods for production of FDCA with an odd number of carbons (o-FDCA). In this work, we explored a novel biosynthetic route to unsaturated o-FDCA. The approach was based on genetic modifications of hsaf pks-nrps, encoding a hybrid polyketide synthase-nonribosomal peptide synthetase (PKS-NRPS) in Lysobacter enzymogenes, an environmental bacterium emerging as a new biocontrol agent. This single-module PKS-NRPS catalyzes the biosynthesis of lysobacterene A, a polyene-containing precursor of the antifungal natural product Heat-Stable Antifungal Factor (HSAF). We genetically removed the NRPS module from this gene and generated a new strain of L. enzymogenes, in which the PKS module was fused to the thioesterase domain of hsaf pks-nrps. The chimeric gene was verified by DNA sequencing, and its expression in L. enzymogenes was confirmed by reverse transcription-polymerase chain reaction (RT-PCR). The total fatty acids were extracted, esterified, and analyzed by GC-MS. The results showed that the engineered strain produced new fatty acids that were absent in the wild type. The main product was identified as hepta-2,4-dienedioic acid, an unsaturated o-FDCA. This work sets the foundation to explore a sustainable and environment-friendly approach toward unsaturated o-FDCA, which could be used as precursors for new compounds that can serve as versatile feedstock for industrial materials.

摘要

脂肪酸二羧酸 (FDCA) 可用作塑料、聚酯、尼龙和香料的起始材料或组成部分。大多数市售的 FDCA 含有偶数个碳原子,而生产奇数个碳原子的 FDCA(o-FDCA)的可持续方法仍然很少。在这项工作中,我们探索了一种生产不饱和 o-FDCA 的新型生物合成途径。该方法基于对 Lysobacter enzymogenes 中编码杂合聚酮合酶-非核糖体肽合酶 (PKS-NRPS) 的 hsaf pks-nrps 的基因修饰,Lysobacter enzymogenes 是一种环境细菌,作为一种新型生物防治剂出现。该单模块 PKS-NRPS 催化多烯前体 Lysobacterene A 的生物合成,该前体是抗真菌天然产物 Heat-Stable Antifungal Factor (HSAF) 的前体。我们从该基因中去除了 NRPS 模块,并生成了一个新的 Lysobacter enzymogenes 菌株,其中 PKS 模块与 hsaf pks-nrps 的硫酯酶结构域融合。通过 DNA 测序验证了嵌合基因,并通过逆转录聚合酶链反应 (RT-PCR) 确认了其在 Lysobacter enzymogenes 中的表达。提取、酯化总脂肪酸并用 GC-MS 分析。结果表明,工程菌株产生了在野生型中不存在的新脂肪酸。主要产物鉴定为庚-2,4-二烯二酸,一种不饱和 o-FDCA。这项工作为探索可持续和环保的不饱和 o-FDCA 方法奠定了基础,该方法可用于作为新化合物的前体,这些新化合物可用作工业材料的多功能原料。

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