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基于ADCY5的DNA甲基化水平升高,2型糖尿病与结直肠癌风险的关联更为密切。

Type 2 diabetes is more closely associated with risk of colorectal cancer based on elevated DNA methylation levels of ADCY5.

作者信息

Wei Jiaxing, Wu Yanmeizhi, Zhang Xiaona, Sun Jingxue, Li Jian, Li Jingjing, Yang Xu, Qiao Hong

机构信息

Department of Endocrinology, The Second Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang 150081, P.R. China.

出版信息

Oncol Lett. 2022 May 12;24(1):206. doi: 10.3892/ol.2022.13327. eCollection 2022 Jul.

Abstract

Type 2 diabetes mellitus (T2DM) has an increased risk of cancer. In the present study, the relationship between T2DM and 13 types of cancer was analyzed and key methylation genes were searched. First, DNA methylation and mRNA expression were obtained data for T2DM and 13 types of cancer from The Cancer Genome Atlas and Gene Expression Omnibus. The t-test was used to screen the differentially methylated expression overlapping genes (DE-MGs) in T2DM and cancer on both methylation and expression levels. DE-MGs are weighted based on the methylation and projected into the human protein interaction network. The correlation between T2DM and each type of cancer was analyzed, and key genes were identified. The results showed that 293 DE-MGs were related to T2DM and 3307 were related to cancer. The network found that T2DM is more related to colorectal cancer (CRC) compare with the other 12 types of cancer. A total of 5 from 8 candidate genes were associated with CRC. A total of 28 clinical patients were used to validate these 5 genes. A CRC tissue sample was collected from each patient, as well as a paracancerous sample that served as a control. A total of 56 tissue samples were divided into 4 groups: control group, T2DM group, CRC group and T2DM with CRC group (combination group). Compared with the control group, the methylation level of adenylate cyclase 5 (ADCY5), neuregulin 1 and ELAV-like RNA-binding protein 4 in the combination group was significantly upregulated, and the mRNA level was significantly downregulated. Furthermore, based on the methylation level of ADCY5, the correlation coefficient between the combination group and the T2DM group was greater than that of the CRC group. In conclusion, T2DM is most likely to be associated with CRC among 13 common types of cancer based on methylation characteristics. An upregulated methylation of ADCY5 in T2DM may have a higher risk of CRC.

摘要

2型糖尿病(T2DM)患癌风险增加。在本研究中,分析了T2DM与13种癌症之间的关系,并搜索了关键甲基化基因。首先,从癌症基因组图谱(The Cancer Genome Atlas)和基因表达综合数据库(Gene Expression Omnibus)获取T2DM和13种癌症的DNA甲基化和mRNA表达数据。采用t检验筛选T2DM与癌症在甲基化和表达水平上的差异甲基化表达重叠基因(DE-MGs)。根据甲基化对DE-MGs进行加权,并将其投射到人类蛋白质相互作用网络中。分析了T2DM与每种癌症类型之间的相关性,并鉴定出关键基因。结果显示,293个DE-MGs与T2DM相关,3307个与癌症相关。该网络发现,与其他12种癌症相比,T2DM与结直肠癌(CRC)的相关性更强。8个候选基因中有5个与CRC相关。共纳入28例临床患者对这5个基因进行验证。从每位患者采集一份CRC组织样本以及一份作为对照的癌旁样本。共56份组织样本分为4组:对照组、T2DM组、CRC组和T2DM合并CRC组(联合组)。与对照组相比,联合组中腺苷酸环化酶5(ADCY5)、神经调节蛋白1和ELAV样RNA结合蛋白4的甲基化水平显著上调,mRNA水平显著下调。此外,基于ADCY5的甲基化水平,联合组与T2DM组之间的相关系数大于CRC组。总之,基于甲基化特征,在13种常见癌症类型中,T2DM最有可能与CRC相关。T2DM中ADCY5甲基化上调可能具有更高的CRC风险。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/684b/9178693/ff34a5989424/ol-24-01-13327-g00.jpg

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