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采用靶向二代测序 panel 对临床疑似青少年发病的成年型糖尿病(MODY)的土耳其患者的十个致病基因进行研究。

Study of ten causal genes in Turkish patients with clinically suspected maturity-onset diabetes of the young (MODY) using a targeted next-generation sequencing panel.

机构信息

Department of Medical Genetics, Genetic Diseases Center, Basaksehir Cam and Sakura City Hospital, 34480, Istanbul, Turkey.

Department of Medical Genetics, Faculty of Medicine, Aksaray University, 81620, Aksaray, Turkey.

出版信息

Mol Biol Rep. 2022 Aug;49(8):7483-7495. doi: 10.1007/s11033-022-07552-5. Epub 2022 Jun 22.

DOI:10.1007/s11033-022-07552-5
PMID:35733065
Abstract

BACKGROUND

Maturity-onset diabetes of the young (MODY), which is the most common cause of monogenic diabetes, has an autosomal dominant pattern of inheritance and exhibits marked clinical and genetic heterogeneity. The aim of the current study was to investigate molecular defects in patients with clinically suspected MODY using a next-generation sequencing (NGS)-based targeted gene panel.

METHODS

Candidate patients with clinical suspicion of MODY and their parents were included in the study. Molecular genetic analyses were performed on genomic DNA by using NGS. A panel of ten MODY-causal genes involving GCK, HNF1A, HNF1B, HNF4A, ABCC8, CEL, INS, KCNJ11, NEUROD1, PDX1 was designed and subsequently implemented to screen 40 patients for genetic variants.

RESULTS

Ten different pathogenic or likely pathogenic variants were identified in MODY-suspected patients, with a diagnostic rate of 25%. Three variants of uncertain significance were also detected in the same screen. A novel pathogenic variant in the gene HNF1A (c.505_506delAA [p.Lys169AlafsTer18]) was described for the first time in this report. Intriguingly, we were able to detect variants associated with rare forms of MODY in our study population.

CONCLUSIONS

Our results suggest that in heterogenous diseases such as MODY, NGS analysis enables accurate identification of underlying molecular defects in a timely and cost-effective manner. Although MODY accounts for 2-5% of all diabetic cases, molecular genetic diagnosis of MODY is necessary for optimal long-term treatment and prognosis as well as for effective genetic counseling.

摘要

背景

青年发病型糖尿病(MODY)是单基因糖尿病最常见的病因,其遗传模式为常染色体显性遗传,表现出明显的临床和遗传异质性。本研究旨在使用基于下一代测序(NGS)的靶向基因panel 对临床疑似 MODY 的患者进行分子缺陷研究。

方法

本研究纳入了临床疑似 MODY 的候选患者及其父母。通过 NGS 对基因组 DNA 进行分子遗传分析。设计了一个包含 GCK、HNF1A、HNF1B、HNF4A、ABCC8、CEL、INS、KCNJ11、NEUROD1 和 PDX1 在内的十个 MODY 相关基因的panel,用于筛查 40 名患者的遗传变异。

结果

在疑似 MODY 的患者中发现了 10 种不同的致病性或可能致病性变异,诊断率为 25%。在同一筛查中还检测到了 3 种意义未明的变异。本研究首次描述了基因 HNF1A 中的一种新的致病性变异(c.505_506delAA [p.Lys169AlafsTer18])。有趣的是,我们能够在研究人群中检测到与罕见形式的 MODY 相关的变异。

结论

我们的研究结果表明,在 MODY 等异质性疾病中,NGS 分析可以及时且经济有效地准确识别潜在的分子缺陷。尽管 MODY 占所有糖尿病病例的 2-5%,但 MODY 的分子遗传诊断对于优化长期治疗和预后以及有效的遗传咨询是必要的。

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Update on clinical screening of maturity-onset diabetes of the young (MODY).青年发病的成年型糖尿病(MODY)临床筛查的最新进展。
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Whole-exome sequencing and high throughput genotyping identified KCNJ11 as the thirteenth MODY gene.外显子组测序和高通量基因分型将 KCNJ11 鉴定为第十三型 MODY 基因。
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