• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

机器学习模型通过计算催化所必需的可转移性来预测计算结果。

Machine Learning Models Predict Calculation Outcomes with the Transferability Necessary for Computational Catalysis.

机构信息

Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States.

Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States.

出版信息

J Chem Theory Comput. 2022 Jul 12;18(7):4282-4292. doi: 10.1021/acs.jctc.2c00331. Epub 2022 Jun 23.

DOI:10.1021/acs.jctc.2c00331
PMID:35737587
Abstract

Virtual high-throughput screening (VHTS) and machine learning (ML) have greatly accelerated the design of single-site transition-metal catalysts. VHTS of catalysts, however, is often accompanied with a high calculation failure rate and wasted computational resources due to the difficulty of simultaneously converging all mechanistically relevant reactive intermediates to expected geometries and electronic states. We demonstrate a dynamic classifier approach, i.e., a convolutional neural network that monitors geometry optimizations on the fly, and exploit its good performance and transferability in identifying geometry optimization failures for catalyst design. We show that the dynamic classifier performs well on all reactive intermediates in the representative catalytic cycle of the radical rebound mechanism for the conversion of methane to methanol despite being trained on only one reactive intermediate. The dynamic classifier also generalizes to chemically distinct intermediates and metal centers absent from the training data without loss of accuracy or model confidence. We rationalize this superior model transferability as arising from the use of electronic structure and geometric information generated on-the-fly from density functional theory calculations and the convolutional layer in the dynamic classifier. When used in combination with uncertainty quantification, the dynamic classifier saves more than half of the computational resources that would have been wasted on unsuccessful calculations for all reactive intermediates being considered.

摘要

虚拟高通量筛选(VHTS)和机器学习(ML)极大地加速了单中心过渡金属催化剂的设计。然而,由于难以同时将所有与反应机理相关的反应中间体收敛到预期的几何形状和电子态,催化剂的 VHTS 往往伴随着高计算失败率和浪费计算资源。我们展示了一种动态分类器方法,即卷积神经网络,它可以实时监测几何优化,并利用其在识别催化剂设计中几何优化失败方面的良好性能和可转移性。我们表明,尽管仅在一个反应中间体上进行了训练,但动态分类器在甲烷转化为甲醇的自由基回弹机制的代表性催化循环中的所有反应中间体上都表现出良好的性能。动态分类器还可以推广到化学性质不同的中间体和训练数据中不存在的金属中心,而不会降低准确性或模型置信度。我们将这种优越的模型可转移性归因于从密度泛函理论计算和动态分类器中的卷积层实时生成的电子结构和几何信息的使用。当与不确定性量化结合使用时,动态分类器为所有正在考虑的反应中间体节省了一半以上的计算资源,这些计算资源本来会因不成功的计算而浪费。

相似文献

1
Machine Learning Models Predict Calculation Outcomes with the Transferability Necessary for Computational Catalysis.机器学习模型通过计算催化所必需的可转移性来预测计算结果。
J Chem Theory Comput. 2022 Jul 12;18(7):4282-4292. doi: 10.1021/acs.jctc.2c00331. Epub 2022 Jun 23.
2
Learning from Failure: Predicting Electronic Structure Calculation Outcomes with Machine Learning Models.从失败中学习:用机器学习模型预测电子结构计算结果。
J Chem Theory Comput. 2019 Apr 9;15(4):2331-2345. doi: 10.1021/acs.jctc.9b00057. Epub 2019 Mar 22.
3
Automatic extraction of cancer registry reportable information from free-text pathology reports using multitask convolutional neural networks.使用多任务卷积神经网络从自由文本病理报告中自动提取癌症登记报告信息。
J Am Med Inform Assoc. 2020 Jan 1;27(1):89-98. doi: 10.1093/jamia/ocz153.
4
Invariant Molecular Representations for Heterogeneous Catalysis.不变分子表示在多相催化中的应用。
J Chem Inf Model. 2024 Jan 22;64(2):327-339. doi: 10.1021/acs.jcim.3c00594. Epub 2024 Jan 10.
5
Applying Large Graph Neural Networks to Predict Transition Metal Complex Energies Using the tmQM_wB97MV Data Set.应用大型图神经网络使用 tmQM_wB97MV 数据集预测过渡金属配合物能量。
J Chem Inf Model. 2023 Dec 25;63(24):7642-7654. doi: 10.1021/acs.jcim.3c01226. Epub 2023 Dec 4.
6
Atomic Structure-Free Representation of Active Motifs for Expedited Catalyst Discovery.无原子结构的活性基元表示法用于加速催化剂发现。
J Chem Inf Model. 2021 Sep 27;61(9):4514-4520. doi: 10.1021/acs.jcim.1c00726. Epub 2021 Aug 23.
7
Transferability of artificial neural networks for clinical document classification across hospitals: A case study on abnormality detection from radiology reports.医院间临床文档分类的人工神经网络可转移性:以放射学报告异常检测为例的研究。
J Biomed Inform. 2018 Sep;85:68-79. doi: 10.1016/j.jbi.2018.07.017. Epub 2018 Jul 17.
8
Navigating Transition-Metal Chemical Space: Artificial Intelligence for First-Principles Design.探索过渡金属化学空间:基于第一性原理设计的人工智能
Acc Chem Res. 2021 Feb 2;54(3):532-545. doi: 10.1021/acs.accounts.0c00686. Epub 2021 Jan 22.
9
Uncertainty-Quantified Hybrid Machine Learning/Density Functional Theory High Throughput Screening Method for Crystals.不确定性量化的混合机器学习/密度泛函理论高通量筛选晶体方法。
J Chem Inf Model. 2020 Apr 27;60(4):1996-2003. doi: 10.1021/acs.jcim.0c00003. Epub 2020 Apr 6.
10
A deep dive into understanding tumor foci classification using multiparametric MRI based on convolutional neural network.基于卷积神经网络,深入探究利用多参数磁共振成像进行肿瘤病灶分类。
Med Phys. 2020 Sep;47(9):4077-4086. doi: 10.1002/mp.14255. Epub 2020 Jun 12.

引用本文的文献

1
New Strategies for Direct Methane-to-Methanol Conversion from Active Learning Exploration of 16 Million Catalysts.通过对1600万种催化剂的主动学习探索实现直接甲烷制甲醇转化的新策略
JACS Au. 2022 Apr 27;2(5):1200-1213. doi: 10.1021/jacsau.2c00176. eCollection 2022 May 23.