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一种全球杂草的旅行故事:L. 的基因组特征揭示了与殖民贸易路线相关的不同基因型群体。

Travel Tales of a Worldwide Weed: Genomic Signatures of L. Reveal Distinct Genotypic Groups With Links to Colonial Trade Routes.

作者信息

Iwanycki Ahlstrand Natalie, Gopalakrishnan Shyam, Vieira Filipe G, Bieker Vanessa C, Meudt Heidi M, Dunbar-Co Stephanie, Rothfels Carl J, Martinez-Swatson Karen A, Maldonado Carla, Hassemer Gustavo, Shipunov Alexey, Bowers M Deane, Gardner Elliot, Xu Maonian, Ghorbani Abdolbaset, Amano Makoto, Grace Olwen M, Pringle James S, Bishop Madonna, Manzanilla Vincent, Cotrim Helena, Blaney Sean, Zubov Dimitri, Choi Hong-Keun, Yesil Yeter, Bennett Bruce, Vimolmangkang Sornkanok, El-Seedi Hesham R, Staub Peter O, Li Zhu, Boldbaatar Delgerbat, Hislop Michael, Caddy Laura J, Muasya A Muthama, Saslis-Lagoudakis C Haris, Gilbert M Thomas P, Zerega Nyree J C, Rønsted Nina

机构信息

Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark.

Globe Institute, University of Copenhagen, Copenhagen, Denmark.

出版信息

Front Plant Sci. 2022 Jun 9;13:838166. doi: 10.3389/fpls.2022.838166. eCollection 2022.

DOI:10.3389/fpls.2022.838166
PMID:35755675
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9218338/
Abstract

Retracing pathways of historical species introductions is fundamental to understanding the factors involved in the successful colonization and spread, centuries after a species' establishment in an introduced range. Numerous plants have been introduced to regions outside their native ranges both intentionally and accidentally by European voyagers and early colonists making transoceanic journeys; however, records are scarce to document this. We use genotyping-by-sequencing and genotype-likelihood methods on the selfing, global weed, , collected from 50 populations worldwide to investigate how patterns of genomic diversity are distributed among populations of this global weed. Although genomic differentiation among populations is found to be low, we identify six unique genotype groups showing very little sign of admixture and low degree of outcrossing among them. We show that genotype groups are latitudinally restricted, and that more than one successful genotype colonized and spread into the introduced ranges. With the exception of New Zealand, only one genotype group is present in the Southern Hemisphere. Three of the most prevalent genotypes present in the native Eurasian range gave rise to introduced populations in the Americas, Africa, Australia, and New Zealand, which could lend support to the hypothesis that was unknowlingly dispersed by early European colonists. Dispersal of multiple successful genotypes is a likely reason for success. Genomic signatures and phylogeographic methods can provide new perspectives on the drivers behind the historic introductions and the successful colonization of introduced species, contributing to our understanding of the role of genomic variation for successful establishment of introduced taxa.

摘要

追溯历史上物种引入的路径对于理解物种在引入地区成功定殖和扩散所涉及的因素至关重要,这一过程发生在物种在引入地区建立数百年之后。许多植物被欧洲航海者和早期跨洋航行的殖民者有意或无意地引入到其原生范围之外的地区;然而,记录这些情况的资料却很稀少。我们对从全球50个种群收集的自花授粉全球杂草[物种名称缺失]采用测序基因分型和基因型似然法,以研究这种全球杂草种群间基因组多样性的分布模式。尽管发现种群间的基因组分化程度较低,但我们识别出六个独特的基因型组,它们之间几乎没有混合迹象且异交程度较低。我们发现基因型组受纬度限制,并且不止一种成功的基因型定殖并扩散到引入地区。除新西兰外,南半球仅存在一个基因型组。在欧亚大陆原生范围内最普遍的三种基因型导致了在美洲、非洲、澳大利亚和新西兰出现引入种群,这可能支持了[物种名称缺失]被早期欧洲殖民者无意中传播的假说。多种成功基因型的扩散可能是其成功的原因。基因组特征和系统地理学方法可以为历史引入及引入物种成功定殖背后的驱动因素提供新的视角,有助于我们理解基因组变异在引入类群成功建立中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f658/9218338/b4371da112a4/fpls-13-838166-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f658/9218338/a1fb79b5033d/fpls-13-838166-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f658/9218338/54134cec6637/fpls-13-838166-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f658/9218338/c0e89bdbbee3/fpls-13-838166-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f658/9218338/b4371da112a4/fpls-13-838166-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f658/9218338/a1fb79b5033d/fpls-13-838166-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f658/9218338/54134cec6637/fpls-13-838166-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f658/9218338/c0e89bdbbee3/fpls-13-838166-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f658/9218338/b4371da112a4/fpls-13-838166-g004.jpg

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