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利用反向疫苗学方法开发针对克里米亚-刚果出血热病毒的多表位亚单位疫苗

Development of Multi-epitope Based Subunit Vaccine Against Crimean-Congo Hemorrhagic Fever Virus Using Reverse Vaccinology Approach.

作者信息

Imran Md Ashik, Islam Md Rubiath, Saha Akash, Ferdousee Shahida, Mishu Moshiul Alam, Ghosh Ajit

机构信息

Department of Biochemistry and Molecular Biology, Shahjalal University of Science and Technology, Sylhet, 3114 Bangladesh.

出版信息

Int J Pept Res Ther. 2022;28(4):124. doi: 10.1007/s10989-022-10430-0. Epub 2022 Jun 24.

Abstract

UNLABELLED

Crimean-Congo hemorrhagic fever (CCHF) is a viral disease caused by the Crimean-Congo hemorrhagic fever virus (CCHFV) of the Nairovirus genus. CCHF has occurred endemically in several regions of Africa, Southern Europe, and Central and Southeast Asia, with a case fatality rate of 5 to 80%. The World health organization enlisted CCHF as one of the top prioritized diseases for research and development in emergency contexts that making it a public health concern as no effective vaccine is available till date. Therefore, the present study aims to develop an effective multi-epitope subunit vaccine using immunoinformatics and reverse vaccinology approach against this virus. The B-cell and T-cell epitopes were predicted from structural and non-structural proteins, and filtered by immunogenicity, allergenicity, toxicity, conservancy, and cross-reactivity. The computational analysis revealed that the epitopes could induce an adequate immune response and had strong associations with their respective human leukocyte antigen (HLA) alleles with 98.94% of total world population coverage. Finally, the vaccine with 427 amino acids was constructed by connecting 8 cytotoxic T-lymphocytes, 4 helper T-lymphocytes, and 10 B-cell epitopes with appropriate linkers and β-defensin as an adjuvant. The antigenicity, allergenicity, solubility, and physiochemical properties of the vaccine were evaluated, followed by structural modelling, refinement, and validation. In addition, molecular docking and molecular dynamic simulations revealed a robust binding affinity and stability of the vaccine-immune receptor complex. Moreover, the codons were optimized for its higher expression in () K12 strain followed by in silico cloning. The proposed subunit vaccine developed in this study could be a potential candidate against CCHFV. However, further experimental validation is required to ensure the immunogenicity and safety profile of the proposed vaccine for combating and eradicating CCHFV.

SUPPLEMENTARY INFORMATION

The online version contains supplementary material available at 10.1007/s10989-022-10430-0.

摘要

未标记

克里米亚-刚果出血热(CCHF)是一种由内罗病毒属的克里米亚-刚果出血热病毒(CCHFV)引起的病毒性疾病。CCHF在非洲、南欧以及中亚和东南亚的多个地区呈地方性流行,病死率为5%至80%。世界卫生组织将CCHF列为紧急情况下研发的重点优先疾病之一,由于至今尚无有效的疫苗,这使其成为一个公共卫生问题。因此,本研究旨在利用免疫信息学和反向疫苗学方法开发一种针对该病毒的有效多表位亚单位疫苗。从结构蛋白和非结构蛋白中预测B细胞和T细胞表位,并通过免疫原性、致敏性、毒性、保守性和交叉反应性进行筛选。计算分析表明,这些表位可诱导充分的免疫反应,并且与各自的人类白细胞抗原(HLA)等位基因有很强的关联,覆盖全球总人口的98.94%。最后,通过将8个细胞毒性T淋巴细胞、4个辅助性T淋巴细胞和10个B细胞表位与合适的连接子连接,并以β-防御素作为佐剂,构建了一种含有427个氨基酸的疫苗。对该疫苗的抗原性、致敏性、溶解性和理化性质进行了评估,随后进行了结构建模、优化和验证。此外,分子对接和分子动力学模拟显示疫苗-免疫受体复合物具有强大的结合亲和力和稳定性。此外,对密码子进行了优化,以使其在()K12菌株中更高表达,随后进行了电子克隆。本研究中开发的拟议亚单位疫苗可能是对抗CCHFV的潜在候选疫苗。然而,需要进一步的实验验证,以确保拟议疫苗在对抗和根除CCHFV方面的免疫原性和安全性。

补充信息

在线版本包含可在10.1007/s10989-022-10430-0获取的补充材料。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/80c9/9244561/0c1fe30607e7/10989_2022_10430_Fig1_HTML.jpg

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