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对话回溯:共生关系建立过程中差异基因表达的时间模式。

Talks Back: Temporal Patterns of Differential Gene Expression During Establishment of Symbiosis.

机构信息

Department of Microbiology and Molecular Genetics, University of California, Davis, CA 95616, U.S.A.

Boyce Thompson Institute, Ithaca, NY 14853, U.S.A.

出版信息

Mol Plant Microbe Interact. 2022 Oct;35(10):917-932. doi: 10.1094/MPMI-05-22-0101-R. Epub 2022 Sep 29.

Abstract

Endosymbiotic associations between hornworts and nitrogen-fixing cyanobacteria form when the plant is limited for combined nitrogen (N). We generated RNA-seq data to examine temporal gene expression patterns during the culturing of N-starved in the absence and the presence of symbiotic cyanobacterium . In symbiont-free .  gametophytes, N starvation caused downregulation of chlorophyll content and chlorophyll fluorescence characteristics as well as transcription of photosynthesis-related genes. This downregulation was reversed in . cocultured with . , corresponding to the provision by the symbiont of N-derived NH, which commenced within 5 days of coculture and reached a maximum by 14 days. We also observed transient increases in transcription of ammonium and nitrate transporters in a . -dependent manner as well as that of a SWEET transporter that was initially independent of N-derived NH. The temporal patterns of differential gene expression indicated that . transmits signals that impact gene expression to . both prior to and after its provision of fixed N. This study is the first illustrating the temporal patterns of gene expression during establishment of an endosymbiotic nitrogen-fixing association in this monophyletic evolutionary lineage of land plants. [Formula: see text] Copyright © 2022 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.

摘要

当植物受到结合态氮限制时,角苔与固氮蓝藻之间会形成共生关系。我们生成了 RNA-seq 数据,以研究在缺乏和存在共生蓝藻的情况下,饥饿的角苔培养过程中的时间基因表达模式。在没有共生体的情况下,角苔配子体的氮饥饿导致叶绿素含量和叶绿素荧光特性下调,以及与光合作用相关的基因转录下调。这种下调在与共生体共培养的 中得到了逆转,这与共生体提供的 N 衍生的 NH 有关,这种提供在共培养后 5 天内开始,并在 14 天达到最大值。我们还观察到铵态和硝酸盐转运蛋白的转录在 依赖的方式以及最初与 N 衍生的 NH 无关的 SWEET 转运蛋白的转录出现短暂增加。差异基因表达的时间模式表明,在共生体提供固定氮之前和之后, 向 传递影响基因表达的信号。本研究首次阐明了在该单系陆地植物进化谱系中,建立共生固氮关系期间基因表达的时间模式。[公式:见文本] 版权所有 © 2022 作者。这是一篇在 CC BY-NC-ND 4.0 国际许可下发布的开放获取文章。

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