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胶质母细胞瘤中 IGFBP 家族成员的预后价值与免疫浸润的综合分析

Comprehensive Analysis of Prognostic Value and Immune Infiltration of IGFBP Family Members in Glioblastoma.

机构信息

Department of Health Examination, The Second People's Hospital of Yibin, Yibin, Sichuan Province 644000, China.

Department of Neurosurgery, The Second People's Hospital of Yibin, Yibin, Sichuan Province 644000, China.

出版信息

J Healthc Eng. 2022 Jul 4;2022:2929695. doi: 10.1155/2022/2929695. eCollection 2022.

Abstract

Glioblastoma (GBM) is the most common primary malignant brain tumor in adults. The insulin-like growth factor-binding protein (IGFBP) family is involved in tumorigenesis and the development of multiple cancers. However, little is known about the prognostic value and regulatory mechanisms of IGFBPs in GBM. Oncomine, Gene Expression Profiling Interactive Analysis, PrognoScan, cBioPortal, LinkedOmics, TIMER, and TISIDB were used to analyze the differential expression, prognostic value, genetic alteration, biological function, and immune cell infiltration of IGFBPs in GBM. We observed that IGFBP1, IGFBP2, IGFBP3, IGFBP4, and IGFBP5 mRNA expression was significantly upregulated in patients with GBM, whereas IGFBP6 was downregulated; this difference in mRNA expression was statistically insignificant. Subsequent investigations showed that IGFBP4 and IGFBP6 mRNA levels were significantly associated with overall survival in patients with GBM. Functional Gene Ontology Annotation and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis revealed that genes coexpressed with IGFBP4 and IGFBP6 were mainly enriched in immune-related pathways. These results were validated using the TIMER and TSMIDB databases. This study demonstrated that the IGFBP family has prognostic value in patients with GBM. IGFBP4 and IGFBP6 are two members of the IGFBP family that had the highest prognostic value; thus, they have the potential to serve as survival predictors and immunotherapeutic targets in GBM.

摘要

胶质母细胞瘤(GBM)是成人中最常见的原发性恶性脑肿瘤。胰岛素样生长因子结合蛋白(IGFBP)家族参与肿瘤发生和多种癌症的发展。然而,关于 IGFBPs 在 GBM 中的预后价值和调控机制知之甚少。Oncomine、基因表达谱交互式分析、PrognoScan、cBioPortal、LinkedOmics、TIMER 和 TISIDB 用于分析 IGFBPs 在 GBM 中的差异表达、预后价值、遗传改变、生物学功能和免疫细胞浸润。我们观察到 IGFBP1、IGFBP2、IGFBP3、IGFBP4 和 IGFBP5 mRNA 在 GBM 患者中表达显著上调,而 IGFBP6 下调;这种 mRNA 表达的差异无统计学意义。随后的研究表明,IGFBP4 和 IGFBP6 mRNA 水平与 GBM 患者的总生存率显著相关。功能基因本体注释和京都基因与基因组百科全书通路富集分析表明,与 IGFBP4 和 IGFBP6 共表达的基因主要富集在免疫相关通路中。这些结果使用 TIMER 和 TSMIDB 数据库进行了验证。这项研究表明 IGFBP 家族在 GBM 患者中有预后价值。IGFBP4 和 IGFBP6 是 IGFBP 家族中具有最高预后价值的两个成员;因此,它们有可能成为 GBM 中生存预测因子和免疫治疗靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e25e/9273392/4751eb9509fe/JHE2022-2929695.001.jpg

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