Laboratory of Clinical Microbiology and Infectious Diseases, Department of Pulmonary and Critical Care Medicine, National Center for Respiratory Medicine, Center of Respiratory Medicine, National Clinical Research Center for Respiratory Diseases, China-Japan Friendship Hospital, Beijing, China.
Institute of Respiratory Medicine, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing, China.
Front Cell Infect Microbiol. 2022 Jul 11;12:922031. doi: 10.3389/fcimb.2022.922031. eCollection 2022.
We characterized the first NDM-5 and MCR-8.2 co-harboring ST656 clinical isolate, combining with chromosomal gene-mediated resistance to colistin and tigecycline. The KP32558 was isolated from the bronchoalveolar lavage fluid from a lung transplant patient. Complete genome sequences were obtained through Illumina HiSeq sequencing and nanopore sequencing. The acquired resistance genes and mutations in chromosome-encoded genes associated with colistin and tigecycline resistance were analyzed. Comparative genomic analysis was conducted between -carrying plasmids. The KP32558 was identified as a pan-drug resistant bacteria, belonging to ST656, and harbored plasmid-encoded and genes. The gene was located on an IncX3 type plasmid. The gene was located on a conjugative plasmid pKP32558-2-mcr8, which had a common ancestor with another two -carrying plasmids pMCR8_020135 and pMCR8_095845. The MIC of KP32558 for colistin was 256 mg/L. The gene and mutations in the two-component system, and , and the regulator , had a synergistic effect on the high-level colistin resistance. The truncation in the gene, related to tigecycline resistance, was also identified. has evolved a variety of complex resistance mechanisms to the last-resort antimicrobials, close surveillance is urgently needed to monitor the prevalence of this clone.
我们对首例同时携带 NDM-5 和 MCR-8.2 的 ST656 临床分离株进行了研究,该分离株结合了染色体基因介导的对黏菌素和替加环素的耐药性。KP32558 是从一名肺移植患者的支气管肺泡灌洗液中分离出来的。通过 Illumina HiSeq 测序和纳米孔测序获得了完整的基因组序列。分析了与黏菌素和替加环素耐药相关的染色体编码基因中获得的耐药基因和突变。对携带质粒进行了比较基因组分析。KP32558 被鉴定为一种泛耐药菌,属于 ST656 型,携带质粒编码的 和 基因。 基因位于 IncX3 型质粒上。 基因位于可移动的质粒 pKP32558-2-mcr8 上,该质粒与另外两个携带 mcr8 的质粒 pMCR8_020135 和 pMCR8_095845 有共同的祖先。KP32558 对黏菌素的 MIC 为 256mg/L。 基因和两个元件系统( 和 )中的突变,以及调节剂 ,对高水平的黏菌素耐药性有协同作用。还发现了与替加环素耐药相关的 基因的截断。 已经进化出多种复杂的耐药机制来对抗最后一线的抗菌药物,迫切需要进行密切监测以监测这种克隆的流行情况。