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纤毛虫生物学的最新进展

Recent Advances in Ciliate Biology.

作者信息

Howard-Till Rachel A, Kar Usha Pallabi, Fabritius Amy S, Winey Mark

机构信息

Department of Molecular and Cellular Biology, University of California, Davis, California, USA; email:

出版信息

Annu Rev Cell Dev Biol. 2022 Oct 6;38:75-102. doi: 10.1146/annurev-cellbio-120420-020656. Epub 2022 Jul 28.

DOI:10.1146/annurev-cellbio-120420-020656
PMID:35901313
Abstract

Ciliates are a diverse group of unicellular eukaryotes that vary widely in size, shape, body plan, and ecological niche. Here, we review recent research advances achieved with ciliate models. Studies on patterning and regeneration have been revived in the giant ciliate , facilitated by modern omics methods. Cryo-electron microscopy and tomography have revolutionized the structural study of complex macromolecules such as telomerase, ribozymes, and axonemes. DNA elimination, gene scrambling, and mating type determination have been deciphered, revealing interesting adaptations of processes that have parallels in other kingdoms of life. Studies of common eukaryotic processes, such as intracellular trafficking, meiosis, and histone modification, reveal conservation as well as unique adaptations in these organisms that are evolutionarily distant from other models. Continual improvement of genetic and molecular tools makes ciliates accessible models for all levels of education and research. Such advances open new avenues of research and highlight the importance of ciliate research.

摘要

纤毛虫是一类多样的单细胞真核生物,其大小、形状、身体结构和生态位差异很大。在这里,我们回顾了纤毛虫模型取得的最新研究进展。在现代组学方法的推动下,对大型纤毛虫的模式形成和再生的研究得以复兴。冷冻电子显微镜和断层扫描技术彻底改变了对端粒酶、核酶和轴丝等复杂大分子的结构研究。DNA消除、基因重排和交配型确定已被破译,揭示了在其他生命王国中具有相似之处的有趣适应性过程。对常见真核过程的研究,如细胞内运输、减数分裂和组蛋白修饰,揭示了这些与其他模型在进化上距离较远的生物中的保守性以及独特的适应性。遗传和分子工具的不断改进使纤毛虫成为适合各级教育和研究的模型。这些进展开辟了新的研究途径,并突出了纤毛虫研究的重要性。

相似文献

1
Recent Advances in Ciliate Biology.纤毛虫生物学的最新进展
Annu Rev Cell Dev Biol. 2022 Oct 6;38:75-102. doi: 10.1146/annurev-cellbio-120420-020656. Epub 2022 Jul 28.
2
A comparative study of genome organization and epigenetic mechanisms in model ciliates, with an emphasis on Tetrahymena, Paramecium and Oxytricha.模式纤毛虫基因组组织和表观遗传机制的比较研究,重点关注四膜虫、草履虫和尖毛虫。
Eur J Protistol. 2017 Oct;61(Pt B):376-387. doi: 10.1016/j.ejop.2017.06.006. Epub 2017 Jul 1.
3
Complex evolutionary patterns within the tubulin gene family of ciliates, unicellular eukaryotes with diverse microtubular structures.纤毛原生动物的微管蛋白基因家族的复杂进化模式,纤毛原生动物是具有多种微管结构的单细胞真核生物。
BMC Biol. 2024 Aug 13;22(1):170. doi: 10.1186/s12915-024-01969-z.
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The Macronuclear Genome of Stentor coeruleus Reveals Tiny Introns in a Giant Cell.《Stentor coeruleus 的巨核基因组揭示了巨型细胞中的微小内含子》
Curr Biol. 2017 Feb 20;27(4):569-575. doi: 10.1016/j.cub.2016.12.057. Epub 2017 Feb 9.
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The kinase regulator mob1 acts as a patterning protein for stentor morphogenesis.激酶调节因子mob1作为一种模式蛋白参与喇叭虫的形态发生。
PLoS Biol. 2014 May 13;12(5):e1001861. doi: 10.1371/journal.pbio.1001861. eCollection 2014 May.
6
Exploration of the Germline Genome of the Ciliate through Single-Cell Omics (Transcriptomics and Genomics).通过单细胞组学(转录组学和基因组学)探索纤毛虫的种系基因组。
mBio. 2018 Jan 9;9(1):e01836-17. doi: 10.1128/mBio.01836-17.
7
Partial cloning of putative G-proteins modulating mechanotransduction in the ciliate stentor.纤毛虫喇叭虫中调节机械转导的假定G蛋白的部分克隆
J Eukaryot Microbiol. 2001 Sep-Oct;48(5):527-36. doi: 10.1111/j.1550-7408.2001.tb00188.x.
8
Characterization of ciliate diversity in bromeliad tank waters from the Brazilian Atlantic Forest.巴西大西洋森林凤梨科植物叶腋积水处纤毛虫多样性的特征分析
Eur J Protistol. 2017 Oct;61(Pt B):359-365. doi: 10.1016/j.ejop.2017.05.005. Epub 2017 May 17.
9
Phenotypic plasticity through disposable genetic adaptation in ciliates.通过纤毛虫的一次性遗传适应实现表型可塑性。
Trends Microbiol. 2022 Feb;30(2):120-130. doi: 10.1016/j.tim.2021.06.007. Epub 2021 Jul 16.
10
Insights into transgenerational epigenetics from studies of ciliates.从纤毛虫研究中洞察跨代表观遗传学。
Eur J Protistol. 2017 Oct;61(Pt B):366-375. doi: 10.1016/j.ejop.2017.05.004. Epub 2017 May 16.

引用本文的文献

1
Genome content reorganization in the non-model ciliate : insights into nuclear architecture, DNA content, and chromosome fragmentation during macronuclear development.非模式纤毛虫中的基因组内容重组:对大核发育过程中核结构、DNA含量和染色体片段化的见解。
mSphere. 2025 Jun 25;10(6):e0007525. doi: 10.1128/msphere.00075-25. Epub 2025 May 9.
2
Lost in translation: conserved amino acid usage despite extreme codon bias in foraminifera.翻译中迷失:有孔虫类尽管密码子偏好性极高但氨基酸使用却保守
mBio. 2025 Apr 9;16(4):e0391624. doi: 10.1128/mbio.03916-24. Epub 2025 Mar 5.
3
Genome content in the non-model ciliate : insights into nuclear architecture, gene-sized chromosomes among the total DNA in their somatic macronuclei during their development.
非模式纤毛虫的基因组内容:对其发育过程中体细胞大核内的核结构、基因大小的染色体在总DNA中的洞察。
bioRxiv. 2024 Nov 14:2024.11.13.623465. doi: 10.1101/2024.11.13.623465.
4
SMORES: a simple microfluidic operating room for the examination and surgery of Stentor coeruleus.SMORES:一种用于检查和手术秀丽隐杆线虫的简易微流控操作室。
Sci Rep. 2024 Apr 15;14(1):8684. doi: 10.1038/s41598-024-59286-y.
5
A Review for the Special Issue on as a Modern Model Organism.关于作为现代模式生物的专题综述。
Microorganisms. 2023 Apr 3;11(4):937. doi: 10.3390/microorganisms11040937.