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基于某些γ-丁内酯和恶唑烷酮的配体在σ2受体与σ1受体上的选择性概况比较:一种分子对接方法。

Selectivity profile comparison for certain γ-butyrolactone and oxazolidinone-based ligands on a sigma 2 receptor over sigma 1: a molecular docking approach.

作者信息

Bhandare Richie R, Sigalapalli Dilep Kumar, Shaik Afzal B, Canney Daniel J, Blass Benjamin E

机构信息

College of Pharmacy & Health Sciences, Ajman University PO Box 340 Ajman United Arab Emirates

Center of Medical and Bio-allied Health Sciences Research, Ajman University Ajman United Arab Emirates.

出版信息

RSC Adv. 2022 Jul 11;12(31):20096-20109. doi: 10.1039/d2ra03497b. eCollection 2022 Jul 6.

Abstract

Sigma receptors (σ R and σ R) are pharmacologically characterized membrane-bound receptors that bind a wide range of chemical compounds. Alzheimer's disease, traumatic brain injury, schizophrenia, and neuropathic pain have all been associated with abnormal σ activity. The σ receptor has recently been identified as a potential therapeutic target for inhibiting the formation of amyloid plaques. Numerous laboratories are now investigating the potential of σ ligands. Small molecule discovery is the focus of current research, with the goal of using target-based action to treat a variety of illnesses and ailments. Functionalized γ-butyrolactone and oxazolidinone-based ligands, in particular, are pharmacologically important scaffolds in drug discovery research and have been thoroughly examined for σ receptor efficacy. The purpose of this study was to evaluate the pharmacophoric features of different σ receptor ligands using techniques. This study used a library of 58 compounds having a γ-butyrolactone and oxazolidinone core. To investigate the binding characteristics of the ligands with the σ receptor, a 3D homology model was developed. To understand the binding pattern of the γ-butyrolactone and oxazolidinone based ligands, molecular docking studies were performed on both σ and σ receptors. Furthermore, MM/GBSA binding energy calculations were used to confirm the binding of ligands on the σ over σ receptor. These findings will aid in the discovery of selective σ ligands with good pharmacophoric properties and potency in the future.

摘要

西格玛受体(σR1和σR2)是具有药理学特征的膜结合受体,可结合多种化合物。阿尔茨海默病、创伤性脑损伤、精神分裂症和神经性疼痛都与σ活性异常有关。最近,σ受体已被确定为抑制淀粉样斑块形成的潜在治疗靶点。目前许多实验室正在研究σ配体的潜力。小分子发现是当前研究的重点,目标是利用基于靶点的作用来治疗各种疾病和不适。特别是,功能化的γ-丁内酯和恶唑烷酮类配体是药物发现研究中具有药理学重要性的支架,并已对其σ受体功效进行了深入研究。本研究的目的是使用[具体技术]评估不同σ受体配体的药效团特征。本研究使用了一个包含58种具有γ-丁内酯和恶唑烷酮核心化合物的文库。为了研究配体与σ受体的结合特性,构建了一个三维同源模型。为了了解基于γ-丁内酯和恶唑烷酮的配体的结合模式,对σR1和σR2受体都进行了分子对接研究。此外,使用MM/GBSA结合能计算来确认配体在σR1受体上相对于σR2受体的结合。这些发现将有助于未来发现具有良好药效团特性和效力的选择性σ配体。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6adc/9272471/bff79ccd3b9d/d2ra03497b-f1.jpg

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