Jiang Qixuan, Cui Ziheng, Wei Ren, Nie Kaili, Xu Haijun, Liu Luo
Beijing Bioprocess Key Laboratory, Beijing University of Chemical Technology, Beijing, China.
Junior Research Group Plastic Biodegradation at Institute of Biochemistry, University of Greifswald, Greifswald, Germany.
Front Bioeng Biotechnol. 2022 Jul 22;10:957694. doi: 10.3389/fbioe.2022.957694. eCollection 2022.
Laccases are regarded as versatile green biocatalysts, and recent scientific research has focused on improving their redox potential for broader industrial and environmental applications. The density functional theory (DFT) quantum mechanics approach, sufficiently rigorous and efficient for the calculation of electronic structures, is conducted to better comprehend the connection between the redox potential and the atomic structural feature of laccases. According to the crystal structure of wild type laccase CueO and its variant, a truncated miniature cluster model method was established in this research. On the basic of thermodynamic cycle, the overall Gibbs free energy variations before and after the one-electron reduction were calculated. It turned out that the trends of redox potentials to increase after variant predicted by the theoretical calculations correlated well with those obtained by experiments, thereby validating the feasibility of this cluster model method for simulating the redox potentials of laccases.
漆酶被视为多功能绿色生物催化剂,近期的科学研究聚焦于提高其氧化还原电位,以实现更广泛的工业和环境应用。密度泛函理论(DFT)量子力学方法在计算电子结构方面足够严谨且高效,被用于更好地理解漆酶氧化还原电位与原子结构特征之间的联系。根据野生型漆酶CueO及其变体的晶体结构,本研究建立了一种截短的微型簇模型方法。基于热力学循环,计算了单电子还原前后的总吉布斯自由能变化。结果表明,理论计算预测的变体后氧化还原电位升高趋势与实验结果高度相关,从而验证了这种簇模型方法模拟漆酶氧化还原电位的可行性。