Ohzeki Junichirou, Kugou Kazuto, Otake Koichiro, Okazaki Koei, Takahashi Seiji, Shibata Daisuke, Masumoto Hiroshi
Laboratory of Chromosome Engineering, Department of Frontier Research and Development, Kazusa DNA Research Institute, Kisarazu, Chiba 292-0818, Japan.
Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, Sendai, Miyagi 980-8579, Japan.
Plant Biotechnol (Tokyo). 2022 Jun 25;39(2):101-110. doi: 10.5511/plantbiotechnology.21.1210a.
Genome information has been accumulated for many species, and these genes and regulatory sequences are expected to be applied in plants by enhancing or creating new metabolic pathways. We hypothesized that manipulating a long array of repetitive sequences using tethered chromatin modulators would be effective for robust regulation of gene expression in close proximity to the arrays. This approach is based on a human artificial chromosome made of long synthetic repetitive DNA sequences in which we manipulated the chromatin by tethering the modifiers. However, a method for introducing long repetitive DNA sequences into plants has not yet been established. Therefore, we constructed a bacterial artificial chromosome-based binary vector in cells to generate a construct in which a cassette of marker genes was inserted into 60-kb synthetic human centromeric repetitive DNA. The binary vector was then transferred to cells and its stable maintenance confirmed. Next, using -mediated genetic transformation, this construct was successfully introduced into the genome of cultured tobacco BY-2 cells to obtain a large number of stable one-copy strains. ChIP analysis of obtained BY-2 cell lines revealed that the introduced synthetic repetitive DNA has moderate chromatin modification levels with lower heterochromatin (H3K9me2) or euchromatin (H3K4me3) modifications compared to the host centromeric repetitive DNA or an active Tub6 gene, respectively. Such a synthetic DNA sequence with moderate chromatin modification levels is expected to facilitate manipulation of the chromatin structure to either open or closed.
许多物种的基因组信息已被积累起来,这些基因和调控序列有望通过增强或创造新的代谢途径应用于植物中。我们假设使用系留染色质调节剂操纵长串重复序列对于在阵列附近强力调控基因表达是有效的。这种方法基于由长合成重复DNA序列构成的人类人工染色体,我们通过系留修饰剂来操纵染色质。然而,将长重复DNA序列导入植物的方法尚未建立。因此,我们在细胞中构建了基于细菌人工染色体的二元载体,以生成一个构建体,其中标记基因盒被插入到60 kb的合成人类着丝粒重复DNA中。然后将二元载体转移到细胞中并确认其稳定维持。接下来,利用介导的遗传转化,将该构建体成功导入培养的烟草BY - 2细胞基因组中,获得了大量稳定的单拷贝菌株。对获得的BY - 2细胞系进行染色质免疫沉淀分析表明,与宿主着丝粒重复DNA或活跃的Tub6基因相比,导入的合成重复DNA具有适度的染色质修饰水平,异染色质(H3K9me2)或常染色质(H3K4me3)修饰较低。这种具有适度染色质修饰水平的合成DNA序列有望促进对染色质结构的操纵,使其开放或关闭。