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利用基因组选择开发基于性能的恢复植物材料。

Using Genomic Selection to Develop Performance-Based Restoration Plant Materials.

机构信息

USDA-Agricultural Research Service, Forage & Range Research Laboratory, 696 North 1100 East, Logan, UT 84322, USA.

USDA-Agricultural Research Service, Range & Meadow Forage Management Research Laboratory, 67826-A Highway 205, Burns, OR 97720, USA.

出版信息

Int J Mol Sci. 2022 Jul 27;23(15):8275. doi: 10.3390/ijms23158275.

Abstract

Effective native plant materials are critical to restoring the structure and function of extensively modified ecosystems, such as the sagebrush steppe of North America's Intermountain West. The reestablishment of native bunchgrasses, e.g., bluebunch wheatgrass ( [Pursh] À. Löve), is the first step for recovery from invasive species and frequent wildfire and towards greater ecosystem resiliency. Effective native plant material exhibits functional traits that confer ecological fitness, phenotypic plasticity that enables adaptation to the local environment, and genetic variation that facilitates rapid evolution to local conditions, i.e., local adaptation. Here we illustrate a multi-disciplinary approach based on genomic selection to develop plant materials that address environmental issues that constrain local populations in altered ecosystems. Based on DNA sequence, genomic selection allows rapid screening of large numbers of seedlings, even for traits expressed only in more mature plants. Plants are genotyped and phenotyped in a training population to develop a genome model for the desired phenotype. Populations with modified phenotypes can be used to identify plant syndromes and test basic hypotheses regarding relationships of traits to adaptation and to one another. The effectiveness of genomic selection in crop and livestock breeding suggests this approach has tremendous potential for improving restoration outcomes for species such as bluebunch wheatgrass.

摘要

有效本土植物材料对于恢复广泛改造的生态系统的结构和功能至关重要,例如北美山间西部的山艾灌丛草原。本土丛生禾草的重建,例如蓝穗冰草([Pursh]A. Löve),是从入侵物种和频繁野火中恢复并走向更大生态系统弹性的第一步。有效本土植物材料具有赋予生态适应性的功能特征、能够适应当地环境的表型可塑性以及促进快速适应当地条件的遗传变异,即本地适应性。在这里,我们展示了一种基于基因组选择的多学科方法,用于开发植物材料,以解决改变生态系统中限制本地种群的环境问题。基于 DNA 序列,基因组选择允许对大量幼苗进行快速筛选,即使是对于仅在更成熟植物中表达的性状也是如此。在训练群体中对植物进行基因型和表型分析,以开发所需表型的基因组模型。具有改良表型的群体可用于识别植物综合征,并检验关于性状与适应性以及彼此之间关系的基本假设。基因组选择在作物和牲畜育种中的有效性表明,这种方法对于改善蓝穗冰草等物种的恢复结果具有巨大潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/88e6/9368130/6966ccd909c6/ijms-23-08275-g001.jpg

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