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通过比较分子细胞遗传学图谱推断染色体结构和45S核糖体DNA组织的差异

The Divergence of Chromosome Structures and 45S Ribosomal DNA Organization in Inferred by Comparative Molecular Cytogenetic Mapping.

作者信息

Setiawan Agus Budi, Purwantoro Aziz, Teo Chee How, Nhi Phan Thi Phuong, Kato Kenji, Kikuchi Shinji, Koba Takato

机构信息

Laboratory of Plant Breeding, Department of Agronomy, Faculty of Agriculture, Universitas Gadjah Mada, Jalan Flora, Bulaksumur, Yogyakarta 55281, Indonesia.

Centre for Research in Biotechnology for Agriculture, University of Malaya, Kuala Lumpur 50603, Malaysia.

出版信息

Plants (Basel). 2022 Jul 28;11(15):1960. doi: 10.3390/plants11151960.

Abstract

W.J.de Wilde & Duyfjes is an annual and monoecious plant. This species is endemic to Southeast Asia, particularly Vietnam. However, is rarely studied, and no detailed information is available regarding its basic chromosome number, 45S ribosomal DNA (rDNA) status, and divergence among other species. In this study, we characterized the morphological characters and determined and investigated the basic chromosome number and chromosomal distribution of 45S rDNA of using the fluorescent in situ hybridization (FISH) technique. A maximum likelihood tree was constructed by combining the chloroplast and internal transcribed spacer of 45S rDNAs to infer its relationship within . had an oval fruit shape, green fruit peel, and protrusion-like white spots during the immature fruit stage. FISH analysis using 45S rDNA probe showed three pairs of 45S rDNA loci located at the terminal region in , similar to . Meanwhile, two, two, and five pairs of 45S rDNA loci were observed for , , and , respectively. One melon (P90) and cucumber accessions exhibited different chromosomal localizations compared with other members of . The majority of species showed the terminal location of 45S rDNA, but melon P90 and cucumber exhibited terminal-interstitial and all interstitial orientations of 45S rDNA loci. Based on molecular cytogenetics and phylogenetic evidence, is more closely related to cucumber than melon. Therefore, may serve as a potential parental accession for genetic improvement of cucumber through interspecific hybridization.

摘要

W.J.de Wilde & Duyfjes是一种一年生雌雄同株植物。该物种为东南亚特有,尤其是越南。然而,其研究很少,关于其基本染色体数、45S核糖体DNA(rDNA)状态以及与其他物种的差异尚无详细信息。在本研究中,我们对其形态特征进行了表征,并使用荧光原位杂交(FISH)技术确定和研究了其基本染色体数以及45S rDNA的染色体分布。通过结合叶绿体和45S rDNAs的内部转录间隔区构建了最大似然树,以推断其在该属内的关系。W.J.de Wilde & Duyfjes果实呈椭圆形,果皮绿色,未成熟果期有突起状白斑。使用45S rDNA探针的FISH分析表明,W.J.de Wilde & Duyfjes有三对45S rDNA位点位于末端区域,与甜瓜属相似。同时,分别在冬瓜、节瓜和毛瓜中观察到两对、两对和五对45S rDNA位点。一个甜瓜(P90)和黄瓜种质与该属其他成员相比表现出不同的染色体定位。大多数甜瓜属物种的45S rDNA位于末端,但甜瓜P90和黄瓜的45S rDNA位点呈现末端 - 中间和全中间方向。基于分子细胞遗传学和系统发育证据,W.J.de Wilde & Duyfjes与黄瓜的亲缘关系比与甜瓜更近。因此,W.J.de Wilde & Duyfjes可能作为通过种间杂交进行黄瓜遗传改良的潜在亲本种质。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f5c/9370355/bd582a9b2630/plants-11-01960-g001.jpg

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