Karpov D S, Spasskaya D S, Tutyaeva V V, Karpov V L
Center for Precision Genome Editing and Genetic Technologies for Biomedicine, Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, 119991 Russia.
Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, 119991 Russia.
Mol Biol (Mosk). 2022 Jul-Aug;56(4):628-641. doi: 10.31857/S002689842204005X.
The ubiquitin-proteasome system is involved in the control of all essential molecular processes under normal conditions and the response of cells to stress. Rpn4p serves as a key transcriptional regulator of the proteasome in Saccharomycetes yeast and is also involved in the cellular response to various stresses. In addition to proteasomal genes, Rpn4 affects the expression of several hundred other genes, including genes involved in DNA repair and oxidative stress response. At the same time, the molecular mechanisms used by Rpn4 in controlling target genes and its functioning as a regulator of the cellular response to stress remain largely unclear. The aim of this work was to determine the Rpn4 domains required to ensure cell resistance to stress. It was shown that the N-terminal and central regions of the protein contain sites required for resistance to all types of stresses. The putative nuclear localization signal does not affect the functioning of Rpn4. Unexpectedly, a protein with the deletion of both zinc finger motifs that form the DNA-binding domain provides yeast resistance to oxidative stress and cycloheximide. Moreover, we showed that Rpn4 can be recruited to the promoter regions of the regulated genes even if they do not contain its binding sites. Based on these data, it can be assumed that Rpn4 is involved in gene regulation and the cellular response to stress due to protein-protein interactions.
泛素 - 蛋白酶体系统在正常条件下参与调控所有基本分子过程以及细胞对应激的反应。Rpn4p是酿酒酵母中蛋白酶体的关键转录调节因子,也参与细胞对各种应激的反应。除了蛋白酶体基因外,Rpn4还影响数百个其他基因的表达,包括参与DNA修复和氧化应激反应的基因。与此同时,Rpn4用于控制靶基因的分子机制及其作为细胞应激反应调节因子的功能在很大程度上仍不清楚。这项工作的目的是确定确保细胞抗应激能力所需的Rpn4结构域。结果表明,该蛋白的N端和中央区域包含抵抗所有类型应激所需的位点。推定的核定位信号不影响Rpn4的功能。出乎意料的是,缺失形成DNA结合结构域的两个锌指基序的蛋白赋予酵母对氧化应激和环己酰亚胺的抗性。此外,我们表明,即使调控基因的启动子区域不包含其结合位点,Rpn4也可以被招募到这些区域。基于这些数据,可以推测Rpn4由于蛋白质 - 蛋白质相互作用而参与基因调控和细胞应激反应。