Institute of Science, Nirma University, Sarkhej-Gandhinagar Highway, Ahmedabad, Gujarat 382481, India.
Institute of Science, Nirma University, Sarkhej-Gandhinagar Highway, Ahmedabad, Gujarat 382481, India.
Int J Biol Macromol. 2022 Nov 1;220:613-626. doi: 10.1016/j.ijbiomac.2022.08.089. Epub 2022 Aug 17.
The extracellular insoluble deposits of highly ordered cross-β-structure-containing amyloid fibrils form the pathological basis for protein misfolding diseases. As amyloid fibrils are cytotoxic, inhibition of the process is a therapeutic strategy. Several small molecules have been identified and used as fibrillation inhibitors in the recent past. In this work, we investigate the effect of Orange G on insulin amyloid formation using fluorescence-based assays and negative-stain electron microscopy (EM). We show that Orange G effectively attenuates nucleation, thereby inhibiting amyloid fibrillation in a dose-dependent manner. Fluorescence quenching titrations of Orange G showed a reasonably strong binding affinity to native insulin. Binding isotherm measurements revealed the binding of Orange G to pre-formed insulin fibrils too, indicating that Orange G likely binds and stabilizes the mature fibrils and prevents the release of toxic oligomers which could be potential nuclei or templates for further fibrillation. Molecular docking of Orange G with native insulin and amyloid-like peptide structures were also carried out to analyse the contributing interactions and binding free energy. The findings of our study emphasize the use of Orange G as a molecular probe to identify and design inhibitors of amyloid fibrillation and to investigate the structural and toxic mechanisms underlying amyloid formation.
高度有序的交叉β结构包含的细胞外不溶性沉积物的淀粉样原纤维形成了蛋白质错误折叠疾病的病理基础。由于淀粉样原纤维具有细胞毒性,因此抑制其形成是一种治疗策略。在最近的研究中,已经鉴定出几种小分子,并将其用作纤维形成抑制剂。在这项工作中,我们使用基于荧光的测定法和负染色电子显微镜(EM)研究了橙 G 对胰岛素淀粉样形成的影响。我们表明,橙 G 可以有效地抑制成核作用,从而以剂量依赖的方式抑制淀粉样纤维的形成。橙 G 的荧光猝灭滴定表明其与天然胰岛素具有相当强的结合亲和力。结合等温线测量也揭示了橙 G 与预形成的胰岛素纤维的结合,表明橙 G 可能结合并稳定成熟的纤维,并防止释放可能是进一步纤维形成的潜在核或模板的毒性寡聚物。还进行了橙 G 与天然胰岛素和淀粉样肽结构的分子对接,以分析贡献的相互作用和结合自由能。我们的研究结果强调了使用橙 G 作为分子探针来鉴定和设计淀粉样纤维形成抑制剂,并研究淀粉样形成的结构和毒性机制。