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作为一种潜在的人ACE2受体结合剂以干扰SARS-CoV-2进入的白杨素:一项计算机辅助分析。

Butein as a potential binder of human ACE2 receptor for interfering with SARS-CoV-2 entry: a computer-aided analysis.

作者信息

Kapoor Neha, Ghorai Soma Mondal, Khuswaha Prem Kumar, Bandichhor Rakeshwar, Brogi Simone

机构信息

Department of Chemistry, Hindu College, University of Delhi, Delhi, 110007, India.

Department of Zoology, Hindu College, University of Delhi, Delhi, 110007, India.

出版信息

J Mol Model. 2022 Aug 24;28(9):270. doi: 10.1007/s00894-022-05270-0.

Abstract

Natural products have been included in our dietary supplements and have been shown to have numerous therapeutic properties. With the looming danger of many zoonotic agents and novel emerging pathogens mainly of viral origin, many researchers are launching various clinical trials, testing these compounds for their antiviral activity. The present work deals with some of the available natural compounds from the literature that have demonstrated activity in counteracting pathogen infections. Accordingly, we screened, using in silico methods, this subset of natural compounds for searching potential drug candidates able to interfere in the recognition of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike protein and its target human angiotensin-converting enzyme 2 (hACE2) receptor, leading to the viral entry. Disrupting that recognition is crucial for slowing down the entrance of viral particles into host cells. The selected group of natural products was examined, and their interaction profiles against the host cell target protein ACE2 were studied at the atomic level. Based on different computer-based procedures including molecular docking, physicochemical property evaluation, and molecular dynamics, butein was identified as a potential hit molecule able to bind the hACE2 receptor. The results indicate that herbal compounds can be effective for providing possible therapeutics for treating and managing coronavirus disease 2019 (COVID-19) infection.

摘要

天然产物已被纳入我们的膳食补充剂中,并已显示出多种治疗特性。鉴于许多人畜共患病原体和主要源自病毒的新型病原体带来的潜在危险,许多研究人员正在开展各种临床试验,测试这些化合物的抗病毒活性。目前的工作涉及文献中一些已证明具有对抗病原体感染活性的天然化合物。因此,我们使用计算机模拟方法筛选了这组天然化合物,以寻找能够干扰严重急性呼吸综合征冠状病毒2(SARS-CoV-2)刺突蛋白及其靶标人类血管紧张素转换酶2(hACE2)受体的识别,从而阻止病毒进入的潜在药物候选物。破坏这种识别对于减缓病毒颗粒进入宿主细胞至关重要。对所选的一组天然产物进行了研究,并在原子水平上研究了它们与宿主细胞靶蛋白ACE2的相互作用情况。基于包括分子对接、物理化学性质评估和分子动力学在内的不同计算机程序,确定了没食子酸是一种能够结合hACE2受体的潜在命中分子。结果表明,草药化合物可为治疗和管理2019冠状病毒病(COVID-19)感染提供有效的治疗方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cb59/9399596/16a2c1e73d34/894_2022_5270_Fig1_HTML.jpg

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