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鉴定免疫相关基因特征作为肾上腺皮质癌的预后靶点和免疫微环境。

Identification of an immune-related gene signature as a prognostic target and the immune microenvironment for adrenocortical carcinoma.

机构信息

Department of Urology, Tongji Hospital, School of Medicine, Tongji University, Shanghai, China.

Department of Urology, Peking University People's Hospital, Beijing, China.

出版信息

Immun Inflamm Dis. 2022 Sep;10(9):e680. doi: 10.1002/iid3.680.

Abstract

BACKGROUND

Adrenocortical carcinoma (ACC) is a rare endocrine malignancy. Even with complete tumor resection and adjuvant therapies, the prognosis of patients with ACC remains unsatisfactory. In the microtumor environment, the impact of a disordered immune system and abnormal immune responses is enormous. To improve treatment, novel prognostic predictors and treatment targets for ACC need to be identified. Hence, credible prognostic biomarkers of immune-associated genes (IRGs) should be explored and developed.

MATERIAL AND METHODS

We downloaded RNA-sequencing data and clinical data from The Cancer Genome Atlas (TCGA) data set, Genotype-Tissue Expression data set, and Gene Expression Omnibus data set. Gene set enrichment analysis (GSEA) was applied to reveal the potential functions of differentially expressed genes.

RESULTS

GSEA indicated an association between ACC and immune-related functions. We obtained 332 IRGs and constructed a prognostic signature on the strength of 3 IRGs (INHBA, HELLS, and HDAC4) in the training cohort. The high-risk group had significantly poorer overall survival than the low-risk group (p < .001). Multivariate Cox regression was performed with the signature as an independent prognostic indicator for ACC. The testing cohort and the entire TCGA ACC cohort were utilized to validate these findings. Moreover, external validation was conducted in the GSE10927 and GSE19750 cohorts. The tumor-infiltrating immune cells analysis indicated that the quantity of T cells, natural killer cells, macrophage cells, myeloid dendritic cells, and mast cells in the immune microenvironment differed between the low-risk and high-risk groups.

CONCLUSION

Our three-IRG prognostic signature and the three IRGs can be used as prognostic indicators and potential immunotherapeutic targets for ACC. Inhibitors of the three novel IRGs might activate immune cells and play a synergistic role in combination therapy with immunotherapy for ACC in the future.

摘要

背景

肾上腺皮质癌(ACC)是一种罕见的内分泌恶性肿瘤。即使进行了完全的肿瘤切除和辅助治疗,ACC 患者的预后仍然不理想。在微小肿瘤环境中,紊乱的免疫系统和异常的免疫反应的影响是巨大的。为了改善治疗效果,需要确定新的 ACC 预后预测因子和治疗靶点。因此,需要探索和开发可靠的免疫相关基因(IRG)预后生物标志物。

材料与方法

我们从癌症基因组图谱(TCGA)数据集、基因-组织表达数据集和基因表达综合数据库下载了 RNA 测序数据和临床数据。采用基因集富集分析(GSEA)来揭示差异表达基因的潜在功能。

结果

GSEA 表明 ACC 与免疫相关功能有关。我们获得了 332 个 IRG,并在训练队列中基于 3 个 IRG(INHBA、HELLS 和 HDAC4)构建了一个预后标志。高危组的总生存期明显低于低危组(p<0.001)。使用该标志作为 ACC 的独立预后指标进行了多变量 Cox 回归分析。该检验队列和整个 TCGA-ACC 队列用于验证这些发现。此外,在 GSE10927 和 GSE19750 队列中进行了外部验证。肿瘤浸润免疫细胞分析表明,低风险组和高风险组之间的免疫微环境中的 T 细胞、自然杀伤细胞、巨噬细胞、髓样树突状细胞和肥大细胞数量存在差异。

结论

我们的三 IRG 预后标志和三个 IRG 可以作为 ACC 的预后指标和潜在的免疫治疗靶点。三种新型 IRG 的抑制剂可能激活免疫细胞,并在未来与免疫疗法联合治疗 ACC 中发挥协同作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b567/9382862/f683b0f81ba1/IID3-10-e680-g011.jpg

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