• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于 NLP 的疟原虫智能计算模型

NLP-BCH-Ens: NLP-based intelligent computational model for discrimination of malaria parasite.

机构信息

Department of Computer Science, Abdul Wali Khan University Mardan, KP, 23400, Pakistan.

Department of Computer Science, Abdul Wali Khan University Mardan, KP, 23400, Pakistan.

出版信息

Comput Biol Med. 2022 Oct;149:105962. doi: 10.1016/j.compbiomed.2022.105962. Epub 2022 Aug 26.

DOI:10.1016/j.compbiomed.2022.105962
PMID:36049412
Abstract

Plasmodium falciparum causes malaria, which is an infectious and fatal disease. In early days, malaria-infected cells were diagnosed using a microscope. owing to a huge number of instances for analysis and intricacy of time, it may lead to false detection. Automated parasite detection technologies are in high demand due to increased time consumption and erroneous detection. To create effective cures and treatments, it is critical to use an accurate approach for predicting malaria parasite. Here, numerous protein sequences formulation techniques namely: discrete methods, Biochemical, physiochemical and Natural language processing techniques are applied for transformation of protein sequences in to numerical descriptors. Four classification algorithms are utilized and the anticipated results of these classifiers were then fused to establish ensemble classification model via simple majority and genetic algorithm. In addition, BCH error correction code is incorporated with support vector machine using all the feature spaces. The simulated results demonstrate the remarkable achievement of proposed compared to previous models. Thus, our proposed model may be an effective tool for discriminating the secretory and non-secretory proteins of malaria parasite.

摘要

疟原虫引起疟疾,这是一种传染性和致命的疾病。在早期,疟疾感染的细胞是使用显微镜诊断的。由于需要分析的实例数量巨大,时间复杂,这可能导致错误的检测。由于时间消耗和错误检测增加,对自动化寄生虫检测技术的需求也很高。为了创造有效的治疗方法,使用准确的方法来预测疟原虫是至关重要的。在这里,许多蛋白质序列制定技术,如:离散方法、生化、物理化学和自然语言处理技术,用于将蛋白质序列转化为数值描述符。利用了四种分类算法,然后通过简单多数和遗传算法融合这些分类器的预期结果,建立集成分类模型。此外,使用所有特征空间将 BCH 纠错码与支持向量机结合使用。模拟结果表明,与以前的模型相比,所提出的方法取得了显著的成果。因此,我们提出的模型可能是区分疟原虫分泌和非分泌蛋白的有效工具。

相似文献

1
NLP-BCH-Ens: NLP-based intelligent computational model for discrimination of malaria parasite.基于 NLP 的疟原虫智能计算模型
Comput Biol Med. 2022 Oct;149:105962. doi: 10.1016/j.compbiomed.2022.105962. Epub 2022 Aug 26.
2
The Development of Machine Learning Methods in Discriminating Secretory Proteins of Malaria Parasite.机器学习方法在鉴别疟原虫分泌蛋白中的研究进展。
Curr Med Chem. 2022;29(5):807-821. doi: 10.2174/0929867328666211005140625.
3
An automatic device for detection and classification of malaria parasite species in thick blood film.一种用于在厚血膜中检测和分类疟原虫种类的自动设备。
BMC Bioinformatics. 2012;13 Suppl 17(Suppl 17):S18. doi: 10.1186/1471-2105-13-S17-S18. Epub 2012 Dec 13.
4
Identification of proteins secreted by malaria parasite into erythrocyte using SVM and PSSM profiles.使用支持向量机和位置特异性得分矩阵概况鉴定疟原虫分泌到红细胞中的蛋白质。
BMC Bioinformatics. 2008 Apr 16;9:201. doi: 10.1186/1471-2105-9-201.
5
IDM-PhyChm-Ens: intelligent decision-making ensemble methodology for classification of human breast cancer using physicochemical properties of amino acids.IDM-PhyChm-Ens:基于氨基酸物理化学性质的人类乳腺癌分类智能决策集成方法
Amino Acids. 2014 Apr;46(4):977-93. doi: 10.1007/s00726-013-1659-x. Epub 2014 Jan 4.
6
In-depth comparative analysis of malaria parasite genomes reveals protein-coding genes linked to human disease in Plasmodium falciparum genome.深入比较分析疟原虫基因组揭示了恶性疟原虫基因组中与人类疾病相关的蛋白质编码基因。
BMC Genomics. 2018 May 2;19(1):312. doi: 10.1186/s12864-018-4654-5.
7
Prediction of mitochondrial proteins of malaria parasite using split amino acid composition and PSSM profile.利用氨基酸组成拆分和 PSSM 图谱预测疟原虫的线粒体蛋白。
Amino Acids. 2010 Jun;39(1):101-10. doi: 10.1007/s00726-009-0381-1. Epub 2009 Nov 12.
8
DSPMP: Discriminating secretory proteins of malaria parasite by hybridizing different descriptors of Chou's pseudo amino acid patterns.DSPMP:通过结合周氏伪氨基酸模式的不同描述符来鉴别疟原虫的分泌蛋白
J Comput Chem. 2015 Dec 5;36(31):2317-27. doi: 10.1002/jcc.24210. Epub 2015 Oct 20.
9
Machine learning approach for automated screening of malaria parasite using light microscopic images.基于机器学习的利用光学显微镜图像进行疟疾寄生虫自动筛查的方法。
Micron. 2013 Feb;45:97-106. doi: 10.1016/j.micron.2012.11.002. Epub 2012 Nov 16.
10
iACP-GAEnsC: Evolutionary genetic algorithm based ensemble classification of anticancer peptides by utilizing hybrid feature space.iACP - GAEnsC:基于进化遗传算法的利用混合特征空间对抗癌肽进行集成分类
Artif Intell Med. 2017 Jun;79:62-70. doi: 10.1016/j.artmed.2017.06.008. Epub 2017 Jun 17.

引用本文的文献

1
Enhanced MRI brain tumor detection using deep learning in conjunction with explainable AI SHAP based diverse and multi feature analysis.结合基于可解释人工智能SHAP的多样多特征分析,利用深度学习增强MRI脑肿瘤检测
Sci Rep. 2025 Aug 11;15(1):29411. doi: 10.1038/s41598-025-14901-4.
2
Protein Sequence Analysis landscape: A Systematic Review of Task Types, Databases, Datasets, Word Embeddings Methods, and Language Models.蛋白质序列分析全景:任务类型、数据库、数据集、词嵌入方法和语言模型的系统综述
Database (Oxford). 2025 May 30;2025. doi: 10.1093/database/baaf027.
3
Ensemble decision of local similarity indices on the biological network for disease related gene prediction.
基于生物网络局部相似性指标的集成决策进行疾病相关基因预测。
PeerJ. 2024 Sep 5;12:e17975. doi: 10.7717/peerj.17975. eCollection 2024.
4
Machine learning for predicting Plasmodium liver stage development in vitro using microscopy imaging.使用显微镜成像的机器学习方法体外预测疟原虫肝期发育情况
Comput Struct Biotechnol J. 2024 Apr 18;24:334-342. doi: 10.1016/j.csbj.2024.04.029. eCollection 2024 Dec.
5
iMRSAPred: Improved Prediction of Anti-MRSA Peptides Using Physicochemical and Pairwise Contact-Energy Properties of Amino Acids.iMRSAPred:利用氨基酸的物理化学性质和成对接触能特性改进抗耐甲氧西林金黄色葡萄球菌肽的预测
ACS Omega. 2024 Jan 3;9(2):2874-2883. doi: 10.1021/acsomega.3c08303. eCollection 2024 Jan 16.
6
On the Analyses of Medical Images Using Traditional Machine Learning Techniques and Convolutional Neural Networks.关于使用传统机器学习技术和卷积神经网络对医学图像进行分析
Arch Comput Methods Eng. 2023;30(5):3173-3233. doi: 10.1007/s11831-023-09899-9. Epub 2023 Apr 4.