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组织和液体前列腺癌标本中真实世界综合基因组分析成功率。

Real-World Comprehensive Genomic Profiling Success Rates in Tissue and Liquid Prostate Carcinoma Specimens.

机构信息

Foundation Medicine, Inc., Cambridge, MA, USA.

Department of Pathology, Upstate Medical University, Syracuse, NY, USA.

出版信息

Oncologist. 2022 Dec 9;27(12):e970-e972. doi: 10.1093/oncolo/oyac181.

Abstract

Challenges with sequencing tissue samples from patients with prostate cancer have been reported in clinical trials. To assess the success rate of comprehensive genomic profiling (CGP) for prostate cancer patients, we analyzed a real-world cohort who underwent sequencing of their prostate tissue sample as well as a subset of patients with a reflex liquid biopsy. Overall, a significant majority (82%) of tissue prostate carcinoma samples yielded reportable CGP results. Of those samples that were unsuccessful, most (75%) were inadequate samples that did not meet pre-established criteria to advance into sequencing. For cases where liquid CGP was performed if tissue CGP was unsuccessful, mutations that were likely attributable to prostate carcinoma were observed in most cases and all cases were successful in generating a report. These results suggest that, for CGP testing, prostate cancer tissue is a reasonable matrix type and that liquid samples can be effectively used as an alternative to tissue.

摘要

在临床试验中已经报道了从前列腺癌患者中测序组织样本所面临的挑战。为了评估全面基因组分析(CGP)在前列腺癌患者中的成功率,我们分析了一组实际接受前列腺组织样本测序的患者,以及一部分进行液体活检的患者。总体而言,绝大多数(82%)的前列腺癌组织样本产生了可报告的 CGP 结果。在那些不成功的样本中,大多数(75%)是不符合预先设定标准进入测序的不充分样本。对于组织 CGP 不成功时进行液体 CGP 的情况,在大多数情况下观察到了可能归因于前列腺癌的突变,并且所有情况下都成功生成了报告。这些结果表明,对于 CGP 检测,前列腺癌组织是一种合理的基质类型,并且液体样本可以有效地用作组织的替代物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b00/9732218/4cae1485727b/oyac181f0001.jpg

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