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四种噻吩-碳酰肼-吡啶衍生物晶体结构中的不同构象和堆积模式。

Different conformations and packing motifs in the crystal structures of four thio-phene-carbohydrazide-pyridine derivatives.

作者信息

Garbutt Jennifer L, da Costa Cristiane F, deSouza Marcus V N, Wardell Solange M S V, Wardell James L, Harrison William T A

机构信息

Department of Chemistry, University of Aberdeen, Meston Walk, Aberdeen AB24 3UE, Scotland.

Fundação Oswaldo Cruz, Instituto de Tecnologia em Fármacos-Far, Manguinhos, 21041-250, Rio de Janeiro, RJ, Brazil.

出版信息

Acta Crystallogr E Crystallogr Commun. 2022 May 17;78(Pt 6):619-624. doi: 10.1107/S2056989022005151. eCollection 2022 Jun 1.

DOI:10.1107/S2056989022005151
PMID:36072151
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9431791/
Abstract

The crystal structures of four thio-phene-carbohydrazide-pyridine derivatives, '-[()-pyridin-3-yl-methyl-idene]thio-phene-2-carbohydrazide, CHNOS, (I), '-[()-pyridin-2-yl-methyl-idene]thio-phene-2-carbohydrazide, CHNOS, (II), -methyl-'-[()-pyridin-2-yl-methyl-idene]thio-phene-2-carbohydrazide, CHNOS, (III) and '-[()-pyridin-2-yl-methyl-idene]-2-(thio-phen-2-yl)ethano-hydrazide, CHNOS, (IV) are described. The dihedral angles between the thio-phene ring and the pyridine ring are 21.4 (2), 15.42 (14), 4.97 (8) and 83.52 (13)° for (I)-(IV), respectively. The thio-phene ring in (IV) is disordered over two orientations in a 0.851 (2):0.149 (2) ratio. Key features of the packing include N-H⋯N (p = pyridine) hydrogen bonds in (I), which generate (7) chains propagating in the [001] direction; N-H⋯N links also feature in (II), but in this case they lead to (6) [001] chains; in (IV), classical amide (4) N-H⋯O links result in [010] chains; in every case adjacent mol-ecules in the chains are related by 2 screw axes. There are no classical hydrogen bonds in the extended structure of (III). Various weak C-H⋯ ( = O, N, S) inter-actions occur in each structure, but no aromatic π-π stacking is evident. The Hirshfeld surfaces and fingerprint plots for (I)-(IV) are compared.

摘要

描述了四种噻吩-碳酰肼-吡啶衍生物,即“-[()-吡啶-3-基-亚甲基]噻吩-2-碳酰肼,CHNOS,(I)、“-[()-吡啶-2-基-亚甲基]噻吩-2-碳酰肼,CHNOS,(II)、-甲基-“-[()-吡啶-2-基-亚甲基]噻吩-2-碳酰肼,CHNOS,(III)和“-[()-吡啶-2-基-亚甲基]-2-(噻吩-2-基)乙酰胺,CHNOS,(IV)的晶体结构。对于(I)-(IV),噻吩环与吡啶环之间的二面角分别为21.4 (2)、15.42 (14)、4.97 (8)和83.52 (13)°。(IV)中的噻吩环在两种取向上无序,比例为0.851 (2):0.149 (2)。堆积的关键特征包括(I)中的N-H⋯N(p = 吡啶)氢键,其产生沿[001]方向传播的(7)链;(II)中也存在N-H⋯N连接,但在这种情况下它们导致(6) [001]链;在(IV)中,经典的酰胺(4) N-H⋯O连接导致[010]链;在每种情况下,链中的相邻分子通过2螺旋轴相关。(III)的扩展结构中没有经典氢键。在每个结构中都发生了各种弱的C-H⋯( = O、N、S)相互作用,但没有明显的芳香π-π堆积。比较了(I)-(IV)的Hirshfeld表面和指纹图谱。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ed/9431791/55e125f4e5f1/e-78-00619-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ed/9431791/009894f2f7b5/e-78-00619-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ed/9431791/94cd3c84ef4a/e-78-00619-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ed/9431791/72fe956b8ad1/e-78-00619-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ed/9431791/b980603c75d1/e-78-00619-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ed/9431791/40bb61621343/e-78-00619-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ed/9431791/dfc8407d460d/e-78-00619-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ed/9431791/55e125f4e5f1/e-78-00619-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ed/9431791/009894f2f7b5/e-78-00619-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ed/9431791/94cd3c84ef4a/e-78-00619-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ed/9431791/72fe956b8ad1/e-78-00619-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ed/9431791/b980603c75d1/e-78-00619-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ed/9431791/40bb61621343/e-78-00619-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ed/9431791/dfc8407d460d/e-78-00619-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/83ed/9431791/55e125f4e5f1/e-78-00619-fig7.jpg

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