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双剑合璧:将 DNA metabarcoding 和稳定同位素分析相结合,提高对河岸特需、迁徙鸣禽的饮食特征描述。

Two is better than one: Coupling DNA metabarcoding and stable isotope analysis improves dietary characterizations for a riparian-obligate, migratory songbird.

机构信息

Department of Biological Sciences, Duquesne University, Pittsburgh, Pennsylvania, USA.

The Cornell Laboratory of Ornithology, Cornell University, Ithaca, New York, USA.

出版信息

Mol Ecol. 2022 Nov;31(21):5635-5648. doi: 10.1111/mec.16688. Epub 2022 Sep 22.

Abstract

While an increasing number of studies are adopting molecular and chemical methods for dietary characterization, these studies often employ only one of these laboratory-based techniques; this approach may yield an incomplete, or even biased, understanding of diet due to each method's inherent limitations. To explore the utility of coupling molecular and chemical techniques for dietary characterizations, we applied DNA metabarcoding alongside stable isotope analysis to characterize the dietary niche of breeding Louisiana waterthrush (Parkesia motacilla), a migratory songbird hypothesized to preferentially provision its offspring with pollution-intolerant, aquatic arthropod prey. While DNA metabarcoding was unable to determine if waterthrush provision aquatic and terrestrial prey in different abundances, we found that specific aquatic taxa were more likely to be detected in successive seasons than their terrestrial counterparts, thus supporting the aquatic specialization hypothesis. Our isotopic analysis added greater context to this hypothesis by concluding that breeding waterthrush provisioned Ephemeroptera and Plecoptera, two pollution-intolerant, aquatic orders, in higher quantities than other prey groups, and expanded their functional trophic niche when such prey were not abundantly provisioned. Finally, we found that the dietary characterizations from each approach were often uncorrelated, indicating that the results gleaned from a diet study can be particularly sensitive to the applied methodologies. Our findings contribute to a growing body of work indicating the importance of high-quality, aquatic habitats for both consumers and their pollution-intolerant prey, while also demonstrating how the application of multiple, laboratory-based techniques can provide insights not offered by either technique alone.

摘要

虽然越来越多的研究采用分子和化学方法来描述饮食,但这些研究通常只使用其中一种实验室技术;由于每种方法都存在固有局限性,这种方法可能会导致对饮食的理解不完整,甚至存在偏差。为了探讨将分子和化学技术结合用于饮食特征描述的效用,我们应用 DNA metabarcoding 与稳定同位素分析相结合,以描述繁殖路易斯安那水鸟(Parkesia motacilla)的饮食生态位,这种候鸟被假设优先为其后代提供不耐污染的水生节肢动物猎物。虽然 DNA metabarcoding 无法确定水鸟是否以不同的丰度提供水生和陆生猎物,但我们发现特定的水生分类群在连续的季节中更有可能被检测到,这支持了水生特化假说。我们的同位素分析通过得出结论为这一假说提供了更多的背景信息,即繁殖水鸟提供了蜉蝣目和蜻蜓目,这两个不耐污染的水生目,比其他猎物群体更多,并且在这些猎物没有大量供应时扩大了它们的功能营养生态位。最后,我们发现两种方法的饮食特征描述往往不相关,这表明从饮食研究中得出的结果特别容易受到应用方法的影响。我们的研究结果为越来越多的工作提供了依据,表明高质量的水生栖息地对消费者及其不耐污染的猎物都很重要,同时也展示了应用多种基于实验室的技术如何提供仅使用一种技术无法提供的见解。

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