Che Yibin, Wang Ge, Xia Qiang
Department of Liver Surgery, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
State Key Laboratory of Oncogenes and Related Genes, Renji-Med X Clinical Stem Cell Research Center, Ren Ji Hospital, Shanghai Cancer Institute, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.
Front Genet. 2022 Aug 29;13:937310. doi: 10.3389/fgene.2022.937310. eCollection 2022.
Hepatocellular carcinoma (HCC) is a tumor with high malignancy and poor 5-years survival rate. Excellent tumor markers are very important for early clinical diagnosis and prognosis evaluation. Previous studies have shown that (Cyclin-dependent kinase 2-associated protein 1) is involved in cell-cycle and epigenetic regulation. In the present study, we assess expression, prognostic value, immunomodulatory and possible influencing pathways in HCC. The Cancer Genome Atlas (TCGA) database was used to analyse gene expression, clinicopathology and prognosis. The protein level of CDK2AP1 in HCC tissues was detected in the Human Protein Atlas (HPA) database. The immune score in HCC to expression were analyzed using ESTIMATE. Furthermore, we use Tumor IMmune Estimation Resource (TIMER) database to study expression and Immune Infiltration Levels in HCC. Co-expressed genes of were predicted and elaborated by LinkedOmics. In normal liver tissues, the expression of was significantly lower than tumor tissues, and was correlated with the level of clinical stage and histologic grade in HCC patients. Patients with high expression of have a poor prognosis than patients with low expression. expression level exhibits significantly positive correlations with the number of infiltrating B cells, CD4 T cells, CD8 T cells, Macrophages, Neutrophils, and DCs in HCC tissues. KEGG enrichment analysis showed that the related pathways affected by mainly include: Fc gamma R-mediated phagocytosis, Th1 and Th2 cell differentiation, Cell cycle, etc. Both and experiments confirmed that promotes the proliferation and metastasis in hepatocellular carcinoma. Our results highlight the role of as an important prognostic indicator and immunotherapy target for HCC patients. We found as a new prognostic biomarker for HCC, which could help explain changes in the biological processes and immune environment lead to liver cancer development. Therefore, is a potential new target for HCC therapy.
肝细胞癌(HCC)是一种恶性程度高、5年生存率低的肿瘤。优秀的肿瘤标志物对于早期临床诊断和预后评估非常重要。先前的研究表明,细胞周期蛋白依赖性激酶2相关蛋白1(Cyclin-dependent kinase 2-associated protein 1)参与细胞周期和表观遗传调控。在本研究中,我们评估了其在肝癌中的表达、预后价值、免疫调节作用及可能的影响途径。利用癌症基因组图谱(TCGA)数据库分析基因表达、临床病理特征和预后情况。在人类蛋白质图谱(HPA)数据库中检测肝癌组织中CDK2AP1的蛋白水平。使用ESTIMATE分析肝癌中CDK2AP1表达的免疫评分。此外,我们利用肿瘤免疫估计资源(TIMER)数据库研究CDK2AP1在肝癌中的表达及免疫浸润水平。通过LinkedOmics预测并阐述了CDK2AP1的共表达基因。在正常肝组织中,CDK2AP1的表达明显低于肿瘤组织,且与肝癌患者的临床分期和组织学分级水平相关。CDK2AP1高表达的患者预后比低表达患者差。CDK2AP1表达水平与肝癌组织中浸润的B细胞、CD4 T细胞、CD8 T细胞、巨噬细胞、中性粒细胞和树突状细胞数量呈显著正相关。KEGG富集分析表明,受CDK2AP1影响的相关途径主要包括:FcγR介导的吞噬作用、Th1和Th2细胞分化、细胞周期等。体内和体外实验均证实CDK2AP1促进肝细胞癌的增殖和转移。我们的结果突出了CDK2AP1作为肝癌患者重要预后指标和免疫治疗靶点的作用。我们发现CDK2AP1是肝癌的一种新的预后生物标志物,有助于解释导致肝癌发生的生物过程和免疫环境变化。因此,CDK2AP1是肝癌治疗的一个潜在新靶点。