Department of Biochemistry and Molecular Biology, The University of Kansas Medical Center, Kansas City, KS 66160, United States.
Eye Research Institute, Oakland University, Rochester, MI 48309, United States.
J Mol Biol. 2022 Nov 15;434(21):167826. doi: 10.1016/j.jmb.2022.167826. Epub 2022 Sep 14.
Accurate quantitative estimates of protein-membrane interactions are critical to studies of membrane proteins. Here, we demonstrate that thermodynamic analyses based on current hydropathy scales do not account for the significant and experimentally determined effects that Ca or Mg have on protein-membrane interactions. We examined distinct modes of interaction (interfacial partitioning and folding and transmembrane insertion) by studying three highly divergent peptides: Bid-BH3 (derived from apoptotic regulator Bid), peripherin-2-derived prph2-CTER, and the cancer-targeting pH-Low-Insertion-Peptide (pHLIP). Fluorescence experiments demonstrate that adding 1-2 mM of divalent cations led to a substantially more favorable bilayer partitioning and insertion, with free energy differences of 5-15 kcal/mol.
准确的蛋白质-膜相互作用的定量估计对于膜蛋白的研究至关重要。在这里,我们证明基于当前疏水力尺度的热力学分析并不能解释钙或镁对蛋白质-膜相互作用的显著和实验确定的影响。我们通过研究三个高度不同的肽来检查不同的相互作用模式(界面分配和折叠以及跨膜插入):Bid-BH3(来自凋亡调节剂 Bid)、外周蛋白-2 衍生的 prph2-CTER 和靶向癌症的 pH 低插入肽(pHLIP)。荧光实验表明,添加 1-2 mM 的二价阳离子会导致更有利的双层分配和插入,自由能差为 5-15 kcal/mol。