Lin Zhengjun, Wu Yanlin, Xiao XunGang, Zhang Xianghong, Wan Jia, Zheng Tao, Chen Hongxuan, Liu Tang, Tang Xianzhe
Department of Orthopedics, The Second Xiangya Hospital, Central South University, Changsha, Hunan, China.
Department of Orthopedics, Chenzhou No. 1 People's Hospital, Chenzhou, Hunan, China.
Front Genet. 2022 Sep 9;13:938510. doi: 10.3389/fgene.2022.938510. eCollection 2022.
CAMP response element binding protein 3-like 1 (CREB3L1) has been indicated as a critical biomarker and can modulate multifaced behaviors of tumor cells in diverse cancers. However, a systematic assessment of CREB3L1 in pan-cancer is of absence, and the predictive value of CREB3L1 in cancer prognosis, the tumor immune microenvironment and the efficacy of immunotherapy remains unexplored. CREB3L1 expression in 33 different cancer types was investigated using RNAseq data from The Cancer Genome Atlas (TCGA) database. The characteristics of CREB3L1 alternations were illustrated in cBioPortal database. The prognostic and clinicopathological value of CREB3L1 was analyzed through clinical data downloaded from the TCGA database. The potential role of CREB3L1 in the tumor immune microenvironment was illustrated by utilizing CIBERSORT and ESTIMATE algorithms, and TISIDB online database. The associations between CREB3L1 expression and tumor mutation burden (TMB), and microsatellite instability (MSI) were assessed by spearman's rank correlation coefficient. Furthermore, Gene Set Enrichment Analysis (GSEA) was conducted to explore the potential biological functions and downstream pathways of CREB3L1 in different human cancers. The correlations of CREB3L1 expression with PD-1/PD-L1 inhibitors efficacy and drug sensitivity were also investigated. The expression of CREB3L1 was abnormally high or low in several different cancer types, and was also strictly associated with the prognosis of cancer patients. CREB3L1 expression levels have a strong relationship with infiltrating immune cells, including regulatory T cells, CD8 T cells, macrophages, B naïve cells, dendritic cells and mast cells. CREB3L1 expression was also correlated with the expression of multiple immune-related biomolecules, TMB, and MSI in several cancers. Moreover, CREB3L1 had promising applications in predicting the immunotherapeutic benefits and drug sensitivity in cancer management. Our results highlight the value of CREB3L1 as a predictive biomarker for the prognosis and immunotherapy efficacy in multiple cancers, and CREB3L1 seems to play key roles in the tumor immune microenvironment, suggesting the role of CREB3L1 as a promising biomarker for predicting the prognosis and immune-related signatures in diverse cancers.
环磷腺苷效应元件结合蛋白3样蛋白1(CREB3L1)已被证明是一种关键的生物标志物,可调节多种癌症中肿瘤细胞的多方面行为。然而,目前缺乏对泛癌中CREB3L1的系统评估,其在癌症预后、肿瘤免疫微环境和免疫治疗疗效方面的预测价值仍未得到探索。利用来自癌症基因组图谱(TCGA)数据库的RNA测序数据,研究了33种不同癌症类型中CREB3L1的表达情况。在cBioPortal数据库中展示了CREB3L1改变的特征。通过从TCGA数据库下载的临床数据,分析了CREB3L1的预后和临床病理价值。利用CIBERSORT和ESTIMATE算法以及TISIDB在线数据库,阐述了CREB3L1在肿瘤免疫微环境中的潜在作用。通过斯皮尔曼等级相关系数评估CREB3L1表达与肿瘤突变负荷(TMB)和微卫星不稳定性(MSI)之间的关联。此外,进行了基因集富集分析(GSEA),以探索CREB3L1在不同人类癌症中的潜在生物学功能和下游途径。还研究了CREB3L1表达与PD-1/PD-L1抑制剂疗效和药物敏感性的相关性。在几种不同的癌症类型中,CREB3L1的表达异常高或低,并且还与癌症患者的预后密切相关。CREB3L1表达水平与浸润性免疫细胞密切相关,包括调节性T细胞、CD8 T细胞、巨噬细胞、幼稚B细胞、树突状细胞和肥大细胞。在几种癌症中,CREB3L1表达还与多种免疫相关生物分子的表达、TMB和MSI相关。此外,CREB3L1在预测癌症治疗中的免疫治疗益处和药物敏感性方面具有良好的应用前景。我们的结果突出了CREB3L1作为多种癌症预后和免疫治疗疗效预测生物标志物的价值,并且CREB3L1似乎在肿瘤免疫微环境中发挥关键作用,表明CREB3L1作为预测不同癌症预后和免疫相关特征的有前景生物标志物的作用。