Suppr超能文献

全面分析 KDM3 基因家族在肝细胞癌中的预后价值和免疫浸润。

Comprehensive Analyses of Prognostic Values and Immune Infiltration of KDM3 Gene Family in Hepatocellular Carcinoma.

机构信息

Division of General Surgery, Department of Surgery, Tri-Service General Hospital, National Defense Medical Center, No. 325, Sec. 2, Cheng-Kung Road, Neihu 114, Taipei, Taiwan.

Department of Biotechnology and Laboratory Science in Medicine, National Yang-Ming Chiao-Tung University, Taipei, Taiwan.

出版信息

Mol Biotechnol. 2023 May;65(5):752-765. doi: 10.1007/s12033-022-00568-z. Epub 2022 Oct 1.

Abstract

Hepatocellular carcinoma (HCC) is one of the most commonly diagnosed malignancy globally with a pessimistic prognosis. Previous studies have demonstrated that abnormal expression of genes in the lysine-specific histone demethylase 3 (KDM3) family with epigenetic changes and dysregulation of enzymes promotes cancer progression. In this study, multiomics analyses were utilized to analyze differential expression, prognostic value, genetic alteration, protein-protein interaction, associated biological pathways and immune cell infiltration of KDM3s in patients with HCC. KDM3A-C were significantly upregulated to different extents based on pathologic and tumor grades in patients with HCC compared to normal tissue. Of note, higher KDM3A expression was associated with poor survival in HCC patients, whereas KDM3B and KDM3C were not associated with survival. Furthermore, KDM3A-B genetic alterations had significant effects on survival in patients with HCC. Analyses of the KEGG pathway and miRNAs targets of KDM3A and KDM3B in HCC may provide potential value in tumor behaviors and treatment. The differential expression of the KDM3 family has a strongly significant correlation with the infiltration of the abundance of immune cells, including B cells, CD8 T cells, CD4 T cells, macrophages, neutrophils, and dendritic cells in HCC. This study indicates that KDM3A may have the potential to be a promising molecular target in terms of prognostic biomarkers or therapeutic targets for HCC treatment.

摘要

肝细胞癌(HCC)是全球最常见的恶性肿瘤之一,预后较差。先前的研究表明,赖氨酸特异性组蛋白去甲基酶 3(KDM3)家族中基因的异常表达与表观遗传改变和酶的失调共同促进了癌症的进展。在本研究中,采用多组学分析方法分析了 HCC 患者中 KDM3 的差异表达、预后价值、遗传改变、蛋白-蛋白相互作用、相关生物途径和免疫细胞浸润。与正常组织相比,HCC 患者的病理和肿瘤分级不同,KDM3A-C 的表达水平显著上调。值得注意的是,KDM3A 的高表达与 HCC 患者的不良生存相关,而 KDM3B 和 KDM3C 与生存无关。此外,KDM3A-B 的遗传改变对 HCC 患者的生存有显著影响。对 HCC 中 KDM3A 和 KDM3B 的 KEGG 通路和 miRNA 靶标的分析可能为肿瘤行为和治疗提供潜在价值。KDM3 家族的差异表达与 HCC 中免疫细胞丰度的浸润有很强的相关性,包括 B 细胞、CD8 T 细胞、CD4 T 细胞、巨噬细胞、中性粒细胞和树突状细胞。本研究表明,KDM3A 可能有潜力成为 HCC 治疗中预后生物标志物或治疗靶点的有前途的分子靶标。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验