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使用全基因组测序对21例染色体平衡异常(BCA)胎儿进行产前诊断。

Prenatal diagnosis of 21 fetuses with balanced chromosomal abnormalities (BCAs) using whole-genome sequencing.

作者信息

Fu Fang, Li Ru, Dang Xiao, Yu Qiuxia, Xu Ke, Gu Weiyue, Wang Dan, Yang Xin, Pan Min, Zhen Li, Zhang Yongling, Li Fatao, Jing Xiangyi, Li Fucheng, Li Dongzhi, Liao Can

机构信息

Prenatal Diagnostic Center, Guangzhou Women and Children's Medical Center, Guangzhou, China.

Guangzhou Medical University, Guangzhou, China.

出版信息

Front Genet. 2022 Sep 15;13:951829. doi: 10.3389/fgene.2022.951829. eCollection 2022.

DOI:10.3389/fgene.2022.951829
PMID:36186435
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9520355/
Abstract

Balanced chromosomal abnormalities (BCAs) are the most common chromosomal abnormalities and the frequency of congenital abnormalities is approximately twice as high in newborns with a BCA, but a prenatal diagnosis based on BCAs is subject to evaluation. To detect translocation breakpoints and conduct a prenatal diagnosis, we performed whole-genome sequencing (WGS) in 21 subjects who were found BCAs, 19 balanced chromosome translocations and two inversions, in prenatal screening. In 16 BCAs on non-N-masked regions (non-NMRs), WGS detected 13 (81.2%, 13/16) BCAs, including all the inversions. All the breakpoints of 12 (12/14) cases of sufficient DNA were confirmed by Sanger sequencing. In 13 interrupted genes, (in case 12) and (in case 17) are known causative and was found in subject (case 11) with situs inversus for the first time. Case 12 with abnormal ultrasound reached a definitive genetic diagnosis of -disease, while exon deletion has never been found causative in patients. WGS provides the possibility of prenatal diagnosis in fetuses with BCAs, and its clinical significance also lies in providing data for postnatal diagnosis.

摘要

平衡性染色体异常(BCAs)是最常见的染色体异常,患有BCA的新生儿先天性异常的发生率大约是正常新生儿的两倍,但基于BCAs的产前诊断仍有待评估。为了检测易位断点并进行产前诊断,我们对21名在产前筛查中被发现患有BCAs的受试者进行了全基因组测序(WGS),其中19例为平衡性染色体易位,2例为倒位。在16个非N掩码区域(non-NMRs)的BCAs中,WGS检测到13个(81.2%,13/16)BCAs,包括所有倒位。12例(12/14)有足够DNA的病例的所有断点均通过桑格测序得到确认。在13个中断基因中,(病例12)和(病例17)是已知的致病基因,而(基因)首次在患有内脏反位的受试者(病例11)中被发现。超声异常的病例12最终确诊为-疾病,而外显子缺失在患者中从未被发现具有致病性。WGS为患有BCAs的胎儿提供了产前诊断的可能性,其临床意义还在于为产后诊断提供数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53c3/9520355/88826ddf5305/fgene-13-951829-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53c3/9520355/67ebdaebfdf5/fgene-13-951829-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53c3/9520355/88826ddf5305/fgene-13-951829-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53c3/9520355/67ebdaebfdf5/fgene-13-951829-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53c3/9520355/88826ddf5305/fgene-13-951829-g002.jpg

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本文引用的文献

1
Topologically Associating Domains and Regulatory Landscapes in Development, Evolution and Disease.发育、进化和疾病中的拓扑相关结构域与调控景观
Front Cell Dev Biol. 2021 Jul 6;9:702787. doi: 10.3389/fcell.2021.702787. eCollection 2021.
2
Facioscapulohumeral muscular dystrophy: genetics, gene activation and downstream signalling with regard to recent therapeutic approaches: an update.面肩肱型肌营养不良症:遗传学、基因激活及近期治疗方法的下游信号转导:最新进展。
Orphanet J Rare Dis. 2021 Mar 12;16(1):129. doi: 10.1186/s13023-021-01760-1.
3
Evaluating the Clinical Utility of Genome Sequencing for Cytogenetically Balanced Chromosomal Abnormalities in Prenatal Diagnosis.
评估基因组测序在产前诊断细胞遗传学平衡染色体异常中的临床应用价值。
Front Genet. 2021 Jan 27;11:620162. doi: 10.3389/fgene.2020.620162. eCollection 2020.
4
Chromosomes in the genomic age. Preserving cytogenomic competence of diagnostic genome laboratories.基因组时代的染色体。保持诊断基因组实验室的细胞基因组学能力。
Eur J Hum Genet. 2021 Apr;29(4):541-552. doi: 10.1038/s41431-020-00780-y. Epub 2020 Dec 11.
5
Evolving genetic heterogeneity of facioscapulohumeral muscular dystrophy.面肩肱型肌营养不良症不断演变的遗传异质性。
Neurology. 2020 Jun 9;94(23):1011-1012. doi: 10.1212/WNL.0000000000009580. Epub 2020 May 28.
6
Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen).《常染色体拷贝数变异解释和报告的技术标准:美国医学遗传学与基因组学学会(ACMG)与临床基因组资源(ClinGen)的联合共识推荐》
Genet Med. 2020 Feb;22(2):245-257. doi: 10.1038/s41436-019-0686-8. Epub 2019 Nov 6.
7
Intronic ATTTC repeat expansions in STARD7 in familial adult myoclonic epilepsy linked to chromosome 2.家族性成年肌阵挛癫痫与 2 号染色体相关的 STARD7 内含子 ATTTC 重复扩展
Nat Commun. 2019 Oct 29;10(1):4920. doi: 10.1038/s41467-019-12671-y.
8
Adapting ACMG/AMP sequence variant classification guidelines for single-gene copy number variants.适应 ACMG/AMP 序列变异分类指南用于单基因拷贝数变异。
Genet Med. 2020 Feb;22(2):336-344. doi: 10.1038/s41436-019-0655-2. Epub 2019 Sep 19.
9
ExpansionHunter: a sequence-graph-based tool to analyze variation in short tandem repeat regions.ExpansionHunter:一种基于序列图的工具,用于分析短串联重复区域的变异。
Bioinformatics. 2019 Nov 1;35(22):4754-4756. doi: 10.1093/bioinformatics/btz431.
10
fastp: an ultra-fast all-in-one FASTQ preprocessor.fastp:一个超快速的一体化 FASTQ 预处理程序。
Bioinformatics. 2018 Sep 1;34(17):i884-i890. doi: 10.1093/bioinformatics/bty560.