Life & Medical Sciences Institute, University of Bonn, Gerhard-Domagk-Str. 1, 53121, Bonn, Germany.
Center of Aptamer Research & Development, University of Bonn, Gerhard-Domagk-Str. 1, 53121, Bonn, Germany.
Chemistry. 2023 Jan 12;29(3):e202202376. doi: 10.1002/chem.202202376. Epub 2022 Nov 22.
The glmS ribozyme regulates the expression of the essential GlmS enzyme being involved in cell wall biosynthesis. While >450 variants of the glmS ribozyme were identified by in silico approaches and homology searches, only a few have yet been experimentally investigated. Herein, we validate and characterize the glmS ribozymes of the human pathogens Clostridium difficile and Listeria monocytogenes. Both ribozymes, as their previous characterized homologs rely on glucosamine-6-phosphate as co-factor and the presence of divalent cations for exerting the cleavage reaction. The observed EC values in turn were found to be in the submicromolar range, at least an order of magnitude lower than observed for glmS ribozymes from other bacteria. The glmS ribozyme of L. monocytogenes was further shown to bear unique properties. It discriminates between co-factors very stringently and other than the glmS ribozyme of C. difficile retains activity at low temperatures. This finding illustrates that albeit being highly conserved, glmS ribozymes have unique characteristics.
GlmS 核酶调节参与细胞壁生物合成的必需 GlmS 酶的表达。虽然通过计算机模拟方法和同源搜索鉴定了 >450 种 glmS 核酶变体,但只有少数变体进行了实验研究。在此,我们验证并表征了人类病原体艰难梭菌和单核细胞增生李斯特菌的 glmS 核酶。这两种核酶与其之前鉴定的同源物一样,依赖于葡萄糖胺-6-磷酸作为辅助因子和二价阳离子的存在来发挥切割反应。观察到的 EC 值反过来又处于亚微摩尔范围内,至少比其他细菌的 glmS 核酶低一个数量级。单核细胞增生李斯特菌的 glmS 核酶进一步表现出独特的性质。它对辅助因子非常严格地进行区分,并且与艰难梭菌的 glmS 核酶不同,它在低温下仍保持活性。这一发现表明,尽管 glmS 核酶高度保守,但它们具有独特的特征。