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锌(II)-卟啉衍生物二聚体的结构和结合能的理论研究。

Theoretical Study of the Structure and Binding Energies of Dimers of Zn(II)-Porphyrin Derivatives.

机构信息

Faculty of Medicine, TOBB University of Economics and Technology, Sogutozu Cd No. 43 Sogutozu, Ankara06560, Turkey.

出版信息

J Phys Chem A. 2022 Oct 13;126(40):7102-7109. doi: 10.1021/acs.jpca.2c03692. Epub 2022 Oct 4.

Abstract

Zinc-complexed porphyrin and chlorophyll derivatives form functional aggregates with remarkable photophysical and optoelectronic properties. Understanding the type and strength of intermolecular interactions between these molecules is essential for designing new materials with desired morphology and functionality. The dimer interactions of a molecular set composed of porphyrin derivatives obtained by substitutional changes starting from free-base porphyrin is studied. It is found that the B97M-rV/def2-TZVP level of theory provides a good compromise between the accuracy and cost to get the dimer geometries and interaction energies (IEs). The neglect of the relaxation energy due to the change in the monomer configurations upon complex formation causes a more significant error than the basis set superposition error. The metal complexation increases the binding energy by about -6 to -8 kcal/mol, and the introduction of keto and hydroxy groups further stabilizes the dimers by about -20 kcal/mol. Although the saturation of one of the pyrrol double bonds does not change the IE, the addition of R groups increases it.

摘要

锌络合卟啉和叶绿素衍生物形成具有显著光物理和光电性质的功能聚集体。了解这些分子之间的分子间相互作用的类型和强度对于设计具有所需形态和功能的新材料至关重要。研究了由从自由碱基卟啉开始进行取代变化得到的卟啉衍生物组成的分子集的二聚体相互作用。结果发现,B97M-rV/def2-TZVP 理论水平在获得二聚体几何形状和相互作用能(IE)的准确性和成本之间提供了很好的折衷。由于单体构象在形成配合物时发生变化而忽略弛豫能会导致比基组超位误差更大的误差。金属络合使结合能增加约 -6 至 -8 kcal/mol,酮基和羟基的引入使二聚体进一步稳定约 -20 kcal/mol。尽管一个吡咯双键的饱和不会改变 IE,但 R 基团的添加会增加它。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd1b/9574925/b83a90428259/jp2c03692_0002.jpg

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