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加那利群岛(西班牙)遗传性血管性水肿的遗传病因目录。

A catalog of the genetic causes of hereditary angioedema in the Canary Islands (Spain).

机构信息

Research Unit, Hospital Universitario Nuestra Señora de Candelaria, Santa Cruz de Tenerife, Spain.

Genomics Division, Instituto Tecnológico y de Energías Renovables, Santa Cruz de Tenerife, Spain.

出版信息

Front Immunol. 2022 Sep 20;13:997148. doi: 10.3389/fimmu.2022.997148. eCollection 2022.

Abstract

Hereditary angioedema (HAE) is a rare disease where known causes involve C1 inhibitor dysfunction or dysregulation of the kinin cascade. The updated HAE management guidelines recommend performing genetic tests to reach a precise diagnosis. Unfortunately, genetic tests are still uncommon in the diagnosis routine. Here, we characterized for the first time the genetic causes of HAE in affected families from the Canary Islands (Spain). Whole-exome sequencing data was obtained from 41 affected patients and unaffected relatives from 29 unrelated families identified in the archipelago. The Hereditary Angioedema Database Annotation (HADA) tool was used for pathogenicity classification and causal variant prioritization among the genes known to cause HAE. Manual reclassification of prioritized variants was used in those families lacking known causal variants. We detected a total of eight different variants causing HAE in this patient series, affecting essentially and genes, one of them being a novel variant (c.686-12A>G) with a predicted splicing effect which was reclassified as likely pathogenic in one family. Altogether, the diagnostic yield by assessing previously reported causal genes and considering variant reclassifications according to the American College of Medical Genetics guidelines reached 66.7% (95% Confidence Interval [CI]: 30.1-91.0) in families with more than one affected member and 10.0% (95% CI: 1.8-33.1) among cases without family information for the disease. Despite the genetic causes of many patients remain to be identified, our results reinforce the need of genetic tests as first-tier diagnostic tool in this disease, as recommended by the international WAO/EAACI guidelines for the management of HAE.

摘要

遗传性血管性水肿 (HAE) 是一种罕见疾病,已知病因涉及 C1 抑制剂功能障碍或激肽级联失调。更新的 HAE 管理指南建议进行基因检测以做出精确诊断。不幸的是,基因检测在诊断常规中仍然不常见。在这里,我们首次对来自加那利群岛(西班牙)的受影响家族的 HAE 的遗传原因进行了特征描述。从该群岛确定的 29 个无关家庭中,获得了 41 名受影响患者和未受影响亲属的全外显子组测序数据。使用 Hereditary Angioedema Database Annotation (HADA) 工具对已知导致 HAE 的基因中的致病性分类和因果变异进行优先级排序。在缺乏已知因果变异的家庭中,使用优先变异的手动重新分类。在该患者系列中,总共检测到导致 HAE 的八种不同变体,主要影响 和 基因,其中一种是新型 变体(c.686-12A>G),具有预测的剪接效应,在一个家族中重新分类为可能的致病性。总体而言,通过评估先前报道的因果基因,并根据美国医学遗传学学院指南考虑根据变异重新分类,在有多个受影响成员的家庭中诊断率达到 66.7%(95%置信区间 [CI]:30.1-91.0),而在没有家族疾病信息的情况下,诊断率为 10.0%(95%CI:1.8-33.1)。尽管许多患者的遗传原因仍有待确定,但我们的结果加强了根据国际 WAO/EAACI 指南推荐将基因检测作为该疾病的一线诊断工具的必要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/594e/9531158/c0d5b06ab573/fimmu-13-997148-g001.jpg

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