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多聚六亚甲基双胍在紫色青霉菌株中耐药机制的研究。

Mechanism of Polyhexamethylene Biguanide Resistance in Purpureocillium lilacinum Strains.

机构信息

Medical Mycology Research Center.

R&D-Safety Science Research, Kao Corporation.

出版信息

Biocontrol Sci. 2022;27(3):117-130. doi: 10.4265/bio.27.117.

Abstract

Purpureocillium lilacinum has been recently found to contaminate a 20% (200,000 μg/mL) aqueous solution of polyhexamethylene biguanide hydrochloride (PHMB) . We aimed to elucidate the mechanism underlying the resistance of P. lilacinum to PHMB. First, we induced the PHMB-resistant (IR) strains IFM 67050 (IR) and IFM 65838 (IR) from the type strain P. lilacinum CBS 284.36 via cultivation in a medium containing high concentrations of PHMB. We then analyzed the DNA sequences via Illumina sequencing to evaluate the presence of genetic mutations in IFM 65838 (IR) . Further, we established an IFM 65838 (IR) uridine/uracil auxotrophic strain, and using the orotidine-5'-decarboxylase gene, pyrG as a selection marker, we tried to knockout a mutant gene in IFM 65838 (IR) using the CRISPR-Cas9 genome-editing technique. The growth rates of IFM 67050 (IR) and IFM 65838 (IR) in medium containing PHMB increased, and the minimum inhibitory concentrations (MICs) against PHMB also increased. Based on the DNA sequence analysis, we found a nonsynonymous point mutation in the gene PLI-008146 (G779A) in IFM 67050 (IR) and IFM 65838 (IR) . This point mutation leads to site combinations of splicing changes that cause partial sequences deletion (p.Y251_G281del) in the ΔPLI-008146 locus of IFM 65838 (IR) , and deletion sequences include partial adenosine/AMP deaminase motif (PF00962) orthologous to adenosine deaminase (ADA) (GeneBank: OAQ82383.1) . Furthermore, the mutant gene ΔPLI-008146 was successfully knocked out from the resistanceinduced strain using a novel CRISPR-Cas9 gene transformation method. A considerable reduction in growth rate and MIC against PHMB was observed in the absence of the mutant gene. Therefore, ADA may represent an important resistance factor in PHMB-resistant P. lilacinum.

摘要

最近发现,紫色毛壳菌会污染 20%(200,000μg/mL)聚六亚甲基双胍盐酸盐水溶液。我们旨在阐明紫色毛壳菌对 PHMB 产生抗性的机制。首先,我们通过在含有高浓度 PHMB 的培养基中培养,从模式菌株紫色毛壳菌 CBS 284.36 诱导产生 PHMB 抗性(IR)菌株 IFM 67050(IR)和 IFM 65838(IR)。然后,我们通过 Illumina 测序分析 DNA 序列,以评估 IFM 65838(IR)中是否存在基因突变。此外,我们建立了 IFM 65838(IR)尿嘧啶/尿嘧啶营养缺陷型菌株,并使用核昔酸 5'-脱羧酶基因 pyrG 作为选择标记,尝试使用 CRISPR-Cas9 基因组编辑技术敲除 IFM 65838(IR)中的突变基因。IFM 67050(IR)和 IFM 65838(IR)在含有 PHMB 的培养基中的生长速度增加,对 PHMB 的最小抑菌浓度(MIC)也增加。基于 DNA 序列分析,我们在 IFM 67050(IR)和 IFM 65838(IR)中发现了基因 PLI-008146(G779A)中的非同义点突变。该点突变导致剪接变化的位点组合,导致 IFM 65838(IR)中 ΔPLI-008146 基因座的部分序列缺失(p.Y251_G281del),缺失序列包括腺苷/AMP 脱氨酶基序(PF00962)的部分同源物(PF00962)腺苷脱氨酶(ADA)(基因库:OQAG23838.1)。此外,使用新型 CRISPR-Cas9 基因转化方法,成功地从抗性诱导菌株中敲除了突变基因 ΔPLI-008146。在缺失突变基因的情况下,生长速度和对 PHMB 的 MIC 明显降低。因此,ADA 可能是 PHMB 抗性紫色毛壳菌的一个重要抗性因素。

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