DGIMI, INRAE, Université de Montpellier, 34090 Montpellier, France.
LIPME, Université de Toulouse, INRAE, CNRS, 31320 Castanet-Tolosan, France.
Int J Mol Sci. 2022 Oct 9;23(19):11981. doi: 10.3390/ijms231911981.
In bacteria, DNA-methyltransferase are responsible for DNA methylation of specific motifs in the genome. This methylation usually occurs at a very high rate. In the present study, we studied the MTases encoding genes found in the entomopathogenic bacteria Xenorhabdus. Only one persistent MTase was identified in the various species of this genus. This MTase, also broadly conserved in numerous Gram-negative bacteria, is called Dam: DNA-adenine MTase. Methylome analysis confirmed that the GATC motifs recognized by Dam were methylated at a rate of >99% in the studied strains. The observed enrichment of unmethylated motifs in putative promoter regions of the X. nematophila F1 strain suggests the possibility of epigenetic regulations. The overexpression of the Dam MTase responsible for additional motifs to be methylated was associated with impairment of two major phenotypes: motility, caused by a downregulation of flagellar genes, and hemolysis. However, our results suggest that dam overexpression did not modify the virulence properties of X. nematophila. This study increases the knowledge on the diverse roles played by MTases in bacteria.
在细菌中,DNA-甲基转移酶负责基因组中特定模体的 DNA 甲基化。这种甲基化通常发生在一个非常高的速度。在本研究中,我们研究了昆虫病原细菌 Xenorhabdus 中发现的 MTases 编码基因。在该属的各种物种中只鉴定出一种持续存在的 MTase。这种 MTase,也广泛存在于许多革兰氏阴性菌中,称为 Dam:DNA-腺嘌呤 MTase。甲基组分析证实,在研究菌株中,Dam 识别的 GATC 模体的甲基化率>99%。在 X. nematophila F1 菌株的假定启动子区域中观察到未甲基化模体的富集,表明存在表观遗传调控的可能性。负责额外模体甲基化的 Dam MTase 的过表达与两种主要表型的损害有关:运动性,由鞭毛基因的下调引起,和溶血。然而,我们的结果表明,dam 过表达并没有改变 X. nematophila 的毒力特性。这项研究增加了对 MTases 在细菌中发挥的不同作用的认识。