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分子对接作为确定新型传染病化合物的先进工具:一项系统综述。

Molecular docking used as an advanced tool to determine novel compounds on emerging infectious diseases: A systematic review.

作者信息

Gouthami Kuruvalli, Veeraraghavan Vadamalai, Rahdar Abbas, Bilal Muhammad, Shah Anshuman, Rai Vandna, Gurumurthy Dummi Mahadevan, Ferreira Luiz Fernando Romanholo, Américo-Pinheiro Juliana Heloisa Pinê, Murari Satish Kumar, Kalia Sanjay, Mulla Sikandar I

机构信息

Department of Biochemistry, School of Allied Health Sciences, REVA University, Bangalore, 560 064, India.

Department of Physics, University of Zabol, Zabol, 98615538, Iran.

出版信息

Prog Biophys Mol Biol. 2022 Oct 12. doi: 10.1016/j.pbiomolbio.2022.10.001.

Abstract

Emerging infectious diseases (EID) as well as reappearing irresistible infections are expanding worldwide. Utmost of similar cases, it was seen that the EIDs have long been perceived as a predominant conclusion of host-pathogen adaption. Here, one should get to analyze their host-pathogen interlink and their by needs to look ways, as an example, by exploitation process methodology particularly molecular docking and molecular dynamics simulation, have been utilized in recent time as the most outstanding tools. Hence, we have overviewed some of important factors that influences on EIDs especially HIV/AIDs, H1N1 and coronavirus. Moreover, here we specified the importance of molecular docking applications especially molecular dynamics simulations approach to determine novel compounds on the emerging infectious diseases. Additionally, in vivo and in vitro studies approach to determine novel compounds on the emerging infectious diseases that has implemented to evaluate the limiting affinities between small particles as well as macromolecule that can further, used as a target of HIV/AIDs, H1N1, and coronavirus were also discussed. These novel drug molecules approved in vivo and in vitro studies with reaffirm results and hence, it is clear that the computational methods (mainly molecular docking and molecular dynamics) are found to be more effective technique for drug discovery and medical practitioners.

摘要

新发传染病(EID)以及再度出现的难治性感染在全球范围内不断增加。在大多数此类病例中,可以看到新发传染病长期以来一直被视为宿主-病原体适应的主要结果。在此,人们应该分析它们的宿主-病原体联系,并通过例如利用过程方法,特别是分子对接和分子动力学模拟等方式来寻找途径,这些方法近年来已被用作最杰出的工具。因此,我们概述了一些影响新发传染病的重要因素,特别是艾滋病毒/艾滋病、H1N1和冠状病毒。此外,我们在此阐述了分子对接应用的重要性,特别是分子动力学模拟方法在确定新发传染病新型化合物方面的应用。此外,还讨论了在体内和体外研究中确定新发传染病新型化合物的方法,该方法已用于评估小分子与大分子之间的结合亲和力,这些小分子和大分子可进一步用作艾滋病毒/艾滋病、H1N1和冠状病毒的靶点。这些新型药物分子在体内和体外研究中均获得了肯定的结果,因此,很明显计算方法(主要是分子对接和分子动力学)是药物发现中更有效的技术,对医学从业者也很有帮助。

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