Wu Hansheng, Xu Haijie, Huang Shujie, Tang Yong, Tang Jiming, Zhou Haiyu, Xie Liang, Qiao Guibin
Department of Thoracic Surgery, The First Affiliated Hospital of Shantou University Medical College, Shantou, China.
The Second School of Clinical Medicine, Southern Medical University, Guangzhou, China.
Front Oncol. 2022 Sep 28;12:989817. doi: 10.3389/fonc.2022.989817. eCollection 2022.
Lung adenocarcinoma (LUAD), the most common type of lung cancer, poses a significant threat to the life of patients. N6-methyladenosine modification is the most abundant epigenetic modification and may play an important role in the lung carcinogenesis. IGF2BP1 is a newly discovered m6A-binding protein, but little is known about its role in LUAD.
Data from TCGA, GEO, Kaplan-Meier Plotter, and GEPIA databases were systematically analyzed to access the expression and prognostic value of IGF2BP1 on LUAD. Real-time polymerase chain reaction, Western blot, and immunohistochemistry were performed to detect the mRNA and protein level of IGF2BP1 in LUAD tissues and para-carcinoma tissues. Functional cell experiments, including Cell Counting Kit-8 assay, Transwell invasion assay, wound healing assay, Annexin V-FITC/PI double-staining assay, and TUNEL assay, were used to investigate the functions of IGF2BP1 on LUAD cell proliferation, invasion, migration, and apoptosis, respectively. The top 50 genes that were positively or negatively related to the expression of IGF2BP1 were identified, and pathway enrichment analysis was performed. mA modification sites within IGF2BP1-related genes were predicted by SRAMP.
16 mA regulators were significantly differentially expressed in LUAD tissues. IGF2BP1 was upregulated in LUAD tissues compared with para-carcinoma tissues. High expression of IGF2PB1 was significantly associated with higher clinical stages and poor prognosis of LUAD patients. Furthermore, our functional experiments indicated that IGF2BP1 facilitated cell proliferation, invasion, and migration and suppressed apoptosis in LUAD. Functional enrichment analysis of IGF2BP1-related genes indicated enrichment in several pathways related to oncogenesis. Additionally, mA modification sites were detected within IGF2BP1-related genes.
Our findings demonstrate that IGF2BP1 plays a contributory role in the development and progression of LUAD. IGF2BP1 has the potential to become a prognostic predictor and therapeutic target for LUAD.
肺腺癌(LUAD)是最常见的肺癌类型,对患者生命构成重大威胁。N6-甲基腺苷修饰是最丰富的表观遗传修饰,可能在肺癌发生中起重要作用。IGF2BP1是一种新发现的m6A结合蛋白,但对其在LUAD中的作用知之甚少。
系统分析来自TCGA、GEO、Kaplan-Meier Plotter和GEPIA数据库的数据,以评估IGF2BP1在LUAD中的表达及预后价值。进行实时聚合酶链反应、蛋白质免疫印迹和免疫组织化学检测LUAD组织和癌旁组织中IGF2BP1的mRNA和蛋白质水平。分别采用细胞计数试剂盒-8检测、Transwell侵袭实验、伤口愈合实验、膜联蛋白V-FITC/PI双染实验和TUNEL实验等功能性细胞实验,研究IGF2BP1对LUAD细胞增殖、侵袭、迁移和凋亡的作用。鉴定与IGF2BP1表达呈正相关或负相关的前50个基因,并进行通路富集分析。通过SRAMP预测IGF2BP1相关基因内的mA修饰位点。
16种mA调节因子在LUAD组织中显著差异表达。与癌旁组织相比,IGF2BP1在LUAD组织中上调。IGF2PB1的高表达与LUAD患者的更高临床分期和不良预后显著相关。此外,我们的功能性实验表明,IGF2BP1促进LUAD细胞增殖、侵袭和迁移,并抑制其凋亡。对IGF2BP1相关基因的功能富集分析表明,其在几个与肿瘤发生相关的通路中富集。此外,在IGF2BP1相关基因内检测到mA修饰位点。
我们的研究结果表明,IGF2BP1在LUAD的发生和发展中起促进作用。IGF2BP1有潜力成为LUAD的预后预测指标和治疗靶点。