Deng Yanyao, Feng Yanjin, Lv Zhicheng, He Jinli, Chen Xun, Wang Chen, Yuan Mingyang, Xu Ting, Gao Wenzhe, Chen Dongjie, Zhu Hongwei, Hou Deren
Department of Rehabilitation, The First Hospital of Changsha, Changsha, China.
Department of Neurology, The Third Xiangya Hospital, Central South University, Changsha, China.
Front Aging Neurosci. 2022 Sep 28;14:994130. doi: 10.3389/fnagi.2022.994130. eCollection 2022.
Alzheimer's disease (AD) is a complex, and multifactorial neurodegenerative disease. Previous studies have revealed that oxidative stress, synaptic toxicity, autophagy, and neuroinflammation play crucial roles in the progress of AD, however, its pathogenesis is still unclear. Recent researches have indicated that ferroptosis, an iron-dependent programmed cell death, might be involved in the pathogenesis of AD. Therefore, we aim to screen correlative ferroptosis-related genes (FRGs) in the progress of AD to clarify insights into the diagnostic value. Interestingly, we identified eight FRGs were significantly differentially expressed in AD patients. 10,044 differentially expressed genes (DEGs) were finally identified by differential expression analysis. The following step was investigating the function of DEGs using gene set enrichment analysis (GSEA). Weight gene correlation analysis was performed to explore ten modules and 104 hub genes. Subsequently, based on machine learning algorithms, we constructed diagnostic classifiers to select characteristic genes. Through the multivariable logistic regression analysis, five features (RAF1, NFKBIA, MOV10L1, IQGAP1, FOXO1) were then validated, which composed a diagnostic model of AD. Thus, our findings not only developed genetic diagnostics strategy, but set a direction for further study of the disease pathogenesis and therapy targets.
阿尔茨海默病(AD)是一种复杂的多因素神经退行性疾病。先前的研究表明,氧化应激、突触毒性、自噬和神经炎症在AD的进展中起关键作用,然而,其发病机制仍不清楚。最近的研究表明,铁死亡,一种铁依赖性程序性细胞死亡,可能参与AD的发病机制。因此,我们旨在筛选AD进展过程中相关的铁死亡相关基因(FRGs),以阐明其诊断价值。有趣的是,我们发现8个FRGs在AD患者中显著差异表达。通过差异表达分析最终确定了10,044个差异表达基因(DEGs)。下一步是使用基因集富集分析(GSEA)研究DEGs的功能。进行加权基因相关分析以探索10个模块和104个枢纽基因。随后,基于机器学习算法,我们构建了诊断分类器以选择特征基因。通过多变量逻辑回归分析,验证了五个特征(RAF1、NFKBIA、MOV10L1、IQGAP1、FOXO1),它们构成了AD的诊断模型。因此,我们的发现不仅开发了遗传诊断策略,还为该疾病的发病机制和治疗靶点的进一步研究指明了方向。