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从辣椒根际分离出的潜在生物防治剂GUAL210的全基因组序列

Complete Genome Sequence of GUAL210, a Potential Biocontrol Agent Isolated from Pepper Rhizosphere.

作者信息

Zhou Zhicheng, Tang Xianying, Peng Lijuan, Ding Haixia

机构信息

Department of Plant Pathology, College of Agriculture, Guizhou University, Guiyang, Guizhou 550025, China.

College of Tobacco Science, Guizhou University, Guiyang, Guizhou 550025, China.

出版信息

Plant Dis. 2023 Mar;107(3):915-918. doi: 10.1094/PDIS-07-22-1585-A. Epub 2023 Jan 14.

Abstract

GUAL210 was isolated from the rhizosphere of healthy pepper plants growing in high-incidence anthracnose fields in Guizhou, China. GUAL210 could be used as a potential biocontrol agent against pepper anthracnose and other soil-borne diseases. The GUAL210 genome consisted of a single circular chromosome 4,011,788 bp in length, with an average GC content of 46.41%, and did not harbor any plasmids. A total of 4,115 protein-coding genes, 27 rRNAs, 87 tRNAs, and 12 secondary metabolite biosynthesis gene clusters were identified. The products of the gene clusters included bacilysin, surfactin, bacteriocin, bacillaene, terpene, and so on, which might help host plants inhibit pathogens. The two clusters predicted to produce terpene had not typically been found in other spp. The findings of this study will provide valuable data to explore the biocontrol mechanisms of strains.

摘要

GUAL210是从中国贵州炭疽病高发田块中健康辣椒植株的根际分离得到的。GUAL210可作为防治辣椒炭疽病和其他土传病害的潜在生防菌。GUAL210基因组由一条长度为4,011,788 bp的单一环状染色体组成,平均GC含量为46.41%,且不含任何质粒。共鉴定出4,115个蛋白质编码基因、27个rRNA、87个tRNA和12个次生代谢物生物合成基因簇。基因簇的产物包括杆菌溶素、表面活性素、细菌素、杆菌烯、萜类等,这些可能有助于寄主植物抑制病原体。预测产生萜类的两个基因簇在其他物种中通常未被发现。本研究结果将为探索该菌株的生防机制提供有价值的数据。

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